Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach12g02026 | ATGGAATCTGACTTGGAGTTCGCTTTTCGTCTCCAGTTGCAAGAAGCACTCGCTGTCTCCCTCGCTTTGGGGCCCTCCTCCTCCTCCTCCTCTTCTTCCGTACAAGAATCCCAGGTCACAGGTTACGTTGACGTTCCAAAGGTCGCTAACCTTCGATCCGAGCAGCTGGCTAAGCTTCAGCAAGAAATCAAGGATCGAGAGCAGAGTGAGATCGAAACGCGTAAGCTCAAGGATGATCTCTGCCGTCGGATACATGATCAGAAGTTTGCAAGGGAGATTCTGAAAGTTTCCGAGGATGATTGGAGAGATTGGGGTGACAATTTCGAGAAACCCCTTGGCGAGGGTTTCTCGAGCTCTAAGCAGGAAACTTTAGGGAGCAACGACGATGCCGTTTTTAAATTGTACTTCAAAGGGATGGTGAGCGAGGAGAGGATTAGAGGTGAAAAAAGTGTTTTAGCAGGGATTGGAATTGCGATATGTGACCCCATGGACAATTTGATATTCGAGGTGAGCAAGCCACTGCTTGGGAATGGAATGAGCAAGAATGCTGCAGAGGCTAAGGCTTTAATTGAAGGGCTTTACGCTGCTGTTGCTTTGGACTTGAGCCGTATCACGTTTTACTGCACCTACCATCCGCTGTACCAATTTGTAAGTGGAAGATGGCCTCCGAAACAGCGGAAGATTGCCATGCTAGTTGATCAGGTTACTCTGCTTCGAAGAAAATTTACATACTGCAATCCAAAGCTTGTGACTGGACGGGATGTTAAATTTGCATTTAAGTTCGCAAAAGATGCAATTATGTCACAGATCAAAATGCCTGAAGAATCTAGCCATTCAAAGAATCCGAATGAGACTTGTGTCATATGTTTGGAAGATACTGATGTTAGCAACATTTTTTCAGTTGATGGCTGTCAACACCGGTATTGCTTTTCTTGCATGAAACAACATGTGGAGGTGAAGTTGCTCCATGGAATGCTGCCAAAATGCCCTCATGAAGGTTGCAATTCTGAACTTGTCATTGACAGCTGCAGGAAATTCTTGACTCGTACATTAATCGAGACCATGCAGAATCGAATAAAGGAAGCATCAATTCCTGTTTCTGAGAAAATTTATTGCCCTTATCCAAGATGCTCTGTATTAATGTCAAAAACTGAGATTTTGGAGTATGCTAAGAATATGTTTGGCGACAGTGCACAATCAGGACCCAAGAAATGCATTAAATGTCATTTTCTTTTCTGTCTCAGCTGCAAAGTCCCTTGGCATAGTGGTCAGACATGCACAGATTACAAAACGTTGAATCCTAACCCTCCTGCTGAAGATGTGAAGCTGAAGTCTCTGGCAACAAGGAGTCTATGGCGGCAGTGTGTGAAGTGCAACCATATGATTGAACTTGCTGAAGGTTGCTACCACATGACTTGCAGATGTGGCTATGAATTTTGCTATAACTGTGGAGCTGAGTGGAAGAACAAGAAAGCAACATGTTCTTGTCCACTTTGGGATGAGGACAATATTTGGTTGGAGGATCACGAGGGAGACACGGAAGAAGAAGAAGGTGAAGAATATTATGAATCTGATAGTTCTGATGATTATTATTAAGCAGGAATTCCCCC | 1610 | 0.4404 | MESDLEFAFRLQLQEALAVSLALGPSSSSSSSSVQESQVTGYVDVPKVANLRSEQLAKLQQEIKDREQSEIETRKLKDDLCRRIHDQKFAREILKVSEDDWRDWGDNFEKPLGEGFSSSKQETLGSNDDAVFKLYFKGMVSEERIRGEKSVLAGIGIAICDPMDNLIFEVSKPLLGNGMSKNAAEAKALIEGLYAAVALDLSRITFYCTYHPLYQFVSGRWPPKQRKIAMLVDQVTLLRRKFTYCNPKLVTGRDVKFAFKFAKDAIMSQIKMPEESSHSKNPNETCVICLEDTDVSNIFSVDGCQHRYCFSCMKQHVEVKLLHGMLPKCPHEGCNSELVIDSCRKFLTRTLIETMQNRIKEASIPVSEKIYCPYPRCSVLMSKTEILEYAKNMFGDSAQSGPKKCIKCHFLFCLSCKVPWHSGQTCTDYKTLNPNPPAEDVKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGYEFCYNCGAEWKNKKATCSCPLWDEDNIWLEDHEGDTEEEEGEEYYESDSSDDYY | 531 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach12g02026 | 531 | ProSiteProfiles | Zinc finger RING-type profile. | 286 | 330 | IPR001841 | - | |
Bach12g02026 | 531 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 184 | 501 | IPR031127 | GO:0004842|GO:0016567 | |
Bach12g02026 | 531 | SMART | ibrneu5 | 439 | 496 | IPR002867 | GO:0008270 | |
Bach12g02026 | 531 | SMART | ibrneu5 | 353 | 426 | IPR002867 | GO:0008270 | |
Bach12g02026 | 531 | Pfam | Zinc finger, C3HC4 type (RING finger) | 286 | 330 | IPR018957 | GO:0046872 | |
Bach12g02026 | 531 | SUPERFAMILY | RING/U-box | 281 | 365 | - | - | |
Bach12g02026 | 531 | CDD | Rcat_RBR_unk | 452 | 487 | - | - | |
Bach12g02026 | 531 | Pfam | IBR domain, a half RING-finger domain | 444 | 494 | IPR002867 | GO:0008270 | |
Bach12g02026 | 531 | Pfam | IBR domain, a half RING-finger domain | 367 | 426 | IPR002867 | GO:0008270 | |
Bach12g02026 | 531 | Pfam | Reverse transcriptase-like | 148 | 265 | IPR002156 | GO:0003676|GO:0004523 | |
Bach12g02026 | 531 | FunFam | RBR-type E3 ubiquitin transferase | 132 | 269 | - | - | |
Bach12g02026 | 531 | FunFam | RBR-type E3 ubiquitin transferase | 424 | 530 | - | - | |
Bach12g02026 | 531 | FunFam | RBR-type E3 ubiquitin transferase | 281 | 366 | - | - | |
Bach12g02026 | 531 | SUPERFAMILY | RING/U-box | 441 | 503 | - | - | |
Bach12g02026 | 531 | MobiDBLite | consensus disorder prediction | 507 | 531 | - | - | |
Bach12g02026 | 531 | Coils | Coil | 59 | 79 | - | - | |
Bach12g02026 | 531 | ProSitePatterns | Zinc finger RING-type signature. | 304 | 313 | IPR017907 | - | |
Bach12g02026 | 531 | ProSiteProfiles | TRIAD supradomain profile. | 282 | 506 | IPR044066 | - | |
Bach12g02026 | 531 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 280 | 364 | IPR013083 | - | |
Bach12g02026 | 531 | Gene3D | - | 132 | 272 | IPR036397 | GO:0003676 | |
Bach12g02026 | 531 | CDD | BRcat_RBR_unk | 366 | 429 | - | - | |
Bach12g02026 | 531 | Gene3D | - | 424 | 527 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach12g02026 | Bach-Chr12 | 18961132 | 18964172 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach12g02026 | 96 | 485 | C3H Transcription Factor Family | AT2G19610 | 32.323 | 2.86e-70 | 229 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach12g02026 | - | - | qsa:O6P43_000294 | 769.229 |