Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g02006 ATGGGTATAGTGGGCACCATTCCACCTCATCTTGGAAACCTATCCTTCCTTAGGAAGTTAGATCTTTCCAACAATACCTTCCATGGTCCTCTTCCTGGTGAATTAGTGCAGTTGCGTAGAATAAAACTCATTAACCTAAAGTTCAATAACTTTAGTGGGGAGATCCCATCATGGTTTGTGTTCTTACAAAAACTTGAAGGTTTGGGATTACGCTATAACAATTTCATAGGTAAAATCACAGACTCCATATTTAACATGACTTCACTGCAAATACTTGATCTTTCTGGTAACAATCTTTGGGGTTCCCTACCATCCAACTTCTTCAACTCCCCTACATTACAATGGGTGAGCGTTTATGGTAACCAAATCTCAGGCCCCATCCCGAGGTCTATTTCAAACATATCATCACTTAGTACTATTGATCTCGGCAACAATAATTTTTCTGGTGAAATCCCAGAAAATTTCTTCTATTACCTTCCTAAGTTGGAATGGTTTAGCTTAGAAGAAAATGACTTCTTTGGAGAAATTCCAACAAGCCTGTTTAATTGCAAGAAACTTCAGGTTCTGTCATTATATAGCAATAGATTCAAAGGAAACGTGCGTAGAGAAATTGGGAACTTGACAATGCTTAATTGGTTGAGGCTTGGCAAGAACAATTTGCAAGATCAAGACATGGTTGCACATGTGACTGATTTTGGCATTGCGAGACTTTTGGGTGGAGATTCCATGACACGCACTATGACACTGGCTACGATAGGATATATGGCTCCTGAGTATGGATGGCAAGGAATTATTTCTATTCAAGGTGATGGATATAGCTATGGTATTTTGCTTATGGAAACCTTCACTAGAAAGAAGCCCACAGATGAAATGTTCCATGGAGAATTTAACATCAAGCACTGGGTTAAAGATTTGTATCATGATGCAATCATTGATATTATTGGTGTCCAACTGATGAAAGAAGACAGAAAACAATTAGCTGCCAAGGACTGCTTGTTATCAATCATAGGGTTAGCAATGGATTGTTCAGCAGATTCTCCAAATGAAAGGAGAAATATGGAAGATGTCTTAGCTGCATTGATAAAGATCAAGATCAAGTTTTTGGACGGACCTACAAATCCCGTAGCATCTGTTTGA 1137 0.3861 MGIVGTIPPHLGNLSFLRKLDLSNNTFHGPLPGELVQLRRIKLINLKFNNFSGEIPSWFVFLQKLEGLGLRYNNFIGKITDSIFNMTSLQILDLSGNNLWGSLPSNFFNSPTLQWVSVYGNQISGPIPRSISNISSLSTIDLGNNNFSGEIPENFFYYLPKLEWFSLEENDFFGEIPTSLFNCKKLQVLSLYSNRFKGNVRREIGNLTMLNWLRLGKNNLQDQDMVAHVTDFGIARLLGGDSMTRTMTLATIGYMAPEYGWQGIISIQGDGYSYGILLMETFTRKKPTDEMFHGEFNIKHWVKDLYHDAIIDIIGVQLMKEDRKQLAAKDCLLSIIGLAMDCSADSPNERRNMEDVLAALIKIKIKFLDGPTNPVASV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g02006 378 FunFam Leucine-rich repeat receptor protein kinase EMS1 128 227 - -
Bach12g02006 378 Gene3D Ribonuclease Inhibitor 1 220 IPR032675 -
Bach12g02006 378 Pfam Leucine rich repeat 44 99 IPR001611 GO:0005515
Bach12g02006 378 Pfam Protein tyrosine and serine/threonine kinase 217 359 IPR001245 GO:0004672|GO:0006468
Bach12g02006 378 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 113 222 - -
Bach12g02006 378 SUPERFAMILY Protein kinase-like (PK-like) 219 362 IPR011009 -
Bach12g02006 378 SUPERFAMILY L domain-like 2 222 - -
Bach12g02006 378 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 32 127 - -
Bach12g02006 378 SMART LRR_typ_2 134 158 IPR003591 -
Bach12g02006 378 SMART LRR_typ_2 159 183 IPR003591 -
Bach12g02006 378 SMART LRR_typ_2 86 110 IPR003591 -
Bach12g02006 378 SMART LRR_typ_2 14 38 IPR003591 -
Bach12g02006 378 Gene3D Transferase(Phosphotransferase) domain 1 221 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g02006 Bach-Chr12 18660030 18663485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g02006 3 61 Receptor kinase-like Gene Family AT1G08590 38.983 5.21e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach12g02006 PK_Tyr_Ser-Thr 1.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g02006 - - jre:108998043 343.584