Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g02002 ATGAACTTCCAACTCAACGGAGTTCACCACTTTGTTCTAATTGTGTTGGTTCTGCTTCATTGCTTTCTGGCGAGTACTACAATTGCAGTGGTTGAAGTACACAATATAAACACCGACCAAACTTCTCTTCTTGCTTTCAAAGACCATATTACTAATGACAGCAATGATTTTCTTGCCAAAAACTGGTCTGTTAAAACCCGTGTGTGCAATTGGATTGGCATCACTTGTGCTTCTTCCCACCTTAGAGTTACAGCCCTTAATCTCTCTAACATGGGTCTTGTGGGAACCATTCCACCTCATCTTGGAAACCTATCCTTCCTTAGGAAGTTAGATCTTTCCAACAATACCTTCCATGGTTCTCTTCCTAGTGAATTAGCGCGGTTGCGTAGAATAAAACTCATTGACCTAAAGTTCAATAACTTTAGTGGGGAGATCCCATCATGGTTTGTGTTCTTACCAAAACTTGAAAGTTTGGGATTACGCTATAACAGTTTCACAGGTAAAATCACAGGCTCCATATTTAACATAACTTCACTGCAAAAACTTGATCTTTGTGGTAACAATATTTGGGGTTCCCTACCATCCAACTTCTTCAACTCCCCTACATTACAGCGGGTGAACGTTTATGGTAACCAAATCTCGGGCCCCATCCCGAGGTCCATTTCGAACATATCATCACTTAGTACTATTAATCTCGGCAACAATAATTTTTCTGGTGATATCCCAGAAAATCTCTTCTATCACCTTCCTAAGTTGGAATTGTTTAGCTTAGAAGAAAATGACTTATTTGGAGATATTCCAGCTAGCCTGTTTAATTGCAAGAAGATGCAAGTTCTGTCGTTATCTAAGAATAGACTCAAAGGAAACATGCCTAGAGAAATTGGGAACTTGACAATGCTTAATTCATTGTACCTCGGCGCAAACAATTTGCAAGATCAAGATATGGTTGCACATGTGACTGATTTTGGTATTGCGAGACTTTTGAGTGGAGATTCCATGACACGCACTATGACACTGGCTACGATGGGGTATATGGCTCCAGAGTATGGAAGGCAAGGAATTATCTCTAGGCAAGGTGATGTATATAGCTATGGTATTTTGCTTATGGAAACCTTCACTGGAAAGAAGCCCACAGATGAAATGTTCCATGGAGAATTTAACATCAAGCACTGGGTTAAAGATTTGTATCCTGATGCAATAATTGATGTTATTGGTGTCCAACTGATGAAAGAAGACAGAGGACAATTAGCTGCCAAGGACTGCTTATTATCAATCATAGGGTTAGCAATGGATTGTTCAGCAGATTCTCCAAATGAAAGGAGAAATATGGGAGATGTCTTAGCTGCATTGATAAAGATCAAGATCAAGTTTGTGGATGGACCTATAAATCCCATAGCATCTGTTTGA 1407 0.3966 MNFQLNGVHHFVLIVLVLLHCFLASTTIAVVEVHNINTDQTSLLAFKDHITNDSNDFLAKNWSVKTRVCNWIGITCASSHLRVTALNLSNMGLVGTIPPHLGNLSFLRKLDLSNNTFHGSLPSELARLRRIKLIDLKFNNFSGEIPSWFVFLPKLESLGLRYNSFTGKITGSIFNITSLQKLDLCGNNIWGSLPSNFFNSPTLQRVNVYGNQISGPIPRSISNISSLSTINLGNNNFSGDIPENLFYHLPKLELFSLEENDLFGDIPASLFNCKKMQVLSLSKNRLKGNMPREIGNLTMLNSLYLGANNLQDQDMVAHVTDFGIARLLSGDSMTRTMTLATMGYMAPEYGRQGIISRQGDVYSYGILLMETFTGKKPTDEMFHGEFNIKHWVKDLYPDAIIDVIGVQLMKEDRGQLAAKDCLLSIIGLAMDCSADSPNERRNMGDVLAALIKIKIKFVDGPINPIASV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g02002 468 Pfam Protein tyrosine and serine/threonine kinase 308 448 IPR001245 GO:0004672|GO:0006468
Bach12g02002 468 Pfam Leucine rich repeat 134 189 IPR001611 GO:0005515
Bach12g02002 468 Pfam Leucine rich repeat 201 262 IPR001611 GO:0005515
Bach12g02002 468 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Bach12g02002 468 Gene3D Ribonuclease Inhibitor 152 244 IPR032675 -
Bach12g02002 468 SUPERFAMILY Protein kinase-like (PK-like) 308 456 IPR011009 -
Bach12g02002 468 Gene3D Ribonuclease Inhibitor 38 151 IPR032675 -
Bach12g02002 468 FunFam Leucine-rich repeat receptor protein kinase EMS1 150 244 - -
Bach12g02002 468 Gene3D Ribonuclease Inhibitor 245 310 IPR032675 -
Bach12g02002 468 ProSiteProfiles Protein kinase domain profile. 136 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g02002 468 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 307 454 - -
Bach12g02002 468 SUPERFAMILY L domain-like 38 312 - -
Bach12g02002 468 SMART LRR_typ_2 104 128 IPR003591 -
Bach12g02002 468 SMART LRR_typ_2 224 248 IPR003591 -
Bach12g02002 468 SMART LRR_typ_2 176 200 IPR003591 -
Bach12g02002 468 SMART LRR_typ_2 249 273 IPR003591 -
Bach12g02002 468 FunFam Leucine-rich repeat receptor-like kinase 39 149 - -
Bach12g02002 468 Gene3D Transferase(Phosphotransferase) domain 1 311 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g02002 Bach-Chr12 18579276 18583005 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g02002 308 454 Receptor kinase-like Gene Family AT1G08590 30.065 3.09e-17 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach12g02002 PK_Tyr_Ser-Thr 1.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g02002 - K19613 cill:122278853 397.897