Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01993 ATGATCTTCCAACTCAATGGAGTTCTAACTGTGTTGGTTCTGCTTCACTGCTTTCTGGTTCGTACTACAATTGCAGTGGTTGAAGTACACAATATAAACACCGACCAGGCTTCTCTTCTTGCTTTCAAAGACCAGATTACTGATGACACCAATGATTTTCTTGCCAAAAACTGGTCTGTTAAAACCCCTGTGTGCAATTGGTTTGGCATAACTTGTGCTTCTTCCCACCTTAGAGTTACAACCCTTAATCTCTCTTGCATGGGTCTTGTGGGCACCATTCCACCTCATCTTGGAAACCTATCCTTCCTTAGGAAGTTAGATCTTTCCAACAATACCTTCCATGGTTCTCTTCCGAGTGAATTAGCGCGGTTGCGTAGAATAAAACTCATTCTCCTAAAGTTCAATAACTTTAGTGGGGAGATCCCATCATGGTTTGTGTTCTTACCAAAACTTGAAAGTATGGGATTACGCTATAACAGTTTCACAGGTAAAATCACAGGCTCCATATTTAACATGACTTCACTGCAAAAACTTGATCTTTGTGGTAACAATCTTTGGGGTTCCTTACCATCCAACTTCTTCAACTCCCCTACATTACAATGGGTGAACGTTTATGGTAACCAAATCTCAGGCCCCATCCCGAGGTCCATTTCAAACATATCATCACTTAGTATTATTAATCTCGGCAACAATAATTTTTCTGGTGAAATCTCAAAAAATTTCTTCTATCACCTTCCTAAGTTGGAAGCGCTTAACTTAGAAGAAAATGACTTCTTTGGAGAAATTCCAGCTAGCCTGTTTAATTGCAAGAAGCTGCAGTATCTGTCGTTATATAACAATAGACTCAAAGGAAAAGTGCCTAGAGAAATTGGGAACTTGACAATGCTTAATTTGTTGTACCTTGGCAACAACAATTTGCAAGATCAAGATATGGTTGCGCATGTGACTGATTTTGGCATTGCGAGACTTTTGGGTGGAGATTCCATGACACACACTATGACACTGGCTACGATGGGGTATATGGCTCCAGAGTATGGATGGCAAGGAATTATTTCTAGGCAAGGTGATGTCTATAGCTATGGTATTTTGCTTATGGAGACCTTCACTGGAAAGAAGCCCACAGATGAAATGTTCCATGGAGAATTTAACATCAAGCACTGGGTTAAAGATTTGTATCCTGATGCAATAATTGACATTATTGGTGTCCAACTGATGAAAGAAGACACAGGACCATTAGCTGCCAAGGACTGCTTATTATCAATCATAGGGTTAGCAATGGATTGTTCAGCAGAATCTCCAAATGAAAGGAGAAATATGAGAGATGTCTTAGCTGCATTGATAAAGATCAAGATCAAGTTTTTGGATGGACCTATAATTCCCAAAGCATCTGTTTGA 1395 0.3971 MIFQLNGVLTVLVLLHCFLVRTTIAVVEVHNINTDQASLLAFKDQITDDTNDFLAKNWSVKTPVCNWFGITCASSHLRVTTLNLSCMGLVGTIPPHLGNLSFLRKLDLSNNTFHGSLPSELARLRRIKLILLKFNNFSGEIPSWFVFLPKLESMGLRYNSFTGKITGSIFNMTSLQKLDLCGNNLWGSLPSNFFNSPTLQWVNVYGNQISGPIPRSISNISSLSIINLGNNNFSGEISKNFFYHLPKLEALNLEENDFFGEIPASLFNCKKLQYLSLYNNRLKGKVPREIGNLTMLNLLYLGNNNLQDQDMVAHVTDFGIARLLGGDSMTHTMTLATMGYMAPEYGWQGIISRQGDVYSYGILLMETFTGKKPTDEMFHGEFNIKHWVKDLYPDAIIDIIGVQLMKEDTGPLAAKDCLLSIIGLAMDCSAESPNERRNMRDVLAALIKIKIKFLDGPIIPKASV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01993 464 Gene3D Ribonuclease Inhibitor 34 146 IPR032675 -
Bach12g01993 464 SUPERFAMILY Protein kinase-like (PK-like) 304 448 IPR011009 -
Bach12g01993 464 Gene3D Ribonuclease Inhibitor 240 306 IPR032675 -
Bach12g01993 464 Gene3D Ribonuclease Inhibitor 147 239 IPR032675 -
Bach12g01993 464 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 240 312 - -
Bach12g01993 464 ProSiteProfiles Protein kinase domain profile. 91 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01993 464 SMART LRR_typ_2 245 269 IPR003591 -
Bach12g01993 464 SMART LRR_typ_2 172 196 IPR003591 -
Bach12g01993 464 SMART LRR_typ_2 100 124 IPR003591 -
Bach12g01993 464 SUPERFAMILY L domain-like 34 308 - -
Bach12g01993 464 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Bach12g01993 464 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 20 110 - -
Bach12g01993 464 Pfam Protein tyrosine and serine/threonine kinase 304 445 IPR001245 GO:0004672|GO:0006468
Bach12g01993 464 Gene3D Transferase(Phosphotransferase) domain 1 307 454 - -
Bach12g01993 464 FunFam Nuclear pore complex protein NUP107 32 191 - -
Bach12g01993 464 Pfam Leucine rich repeat 197 258 IPR001611 GO:0005515
Bach12g01993 464 Pfam Leucine rich repeat 130 185 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01993 Bach-Chr12 18425465 18429164 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01993 303 453 Receptor kinase-like Gene Family AT3G47570 38.365 4.30e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach12g01993 PK_Tyr_Ser-Thr 6.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01993 - K19613 cill:122278853 373.629