Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01989 ATGAACTTCCAACTCAATGGAGTTCACTACTTCTTTGTTCTAACTGTGTTGGTTCTGCTTCACTGCTTTCTGGCTCGTGCTACAATTGCAGTGGTTGAAGTTCACAATATAAACACCGACCAGGCTTCTCTTCTTGCTTTCAAAGACCATATTACTGATGACCCCAATGATTTTCTTGCCAAAAACTGGAACTTAGATCTTTCCAACAATACCTTCCACGGTTCTCTTCCTAGTGAATTAGCGCAGTTGCGTAGAATAAAATTCATTCGCCTAAATTTCAATAACTTTAGTGGGGAGATCCCATCATGGTTTGTGTTCTTACCAAAACTTGAAAGTTTGGAATTACGCTATAACAGTTTCACAGGTAACATCACAGGCTCCATATTTAACATAACTTCACTGCAAAAACTTGATCTTACAGGTAACAATGTTTGGGGTTCCCTTCCATCCAACTTCTTCAACTCCCCTACATTACAATGGGTGAGCGTTTATGGTAACCAAATCTCAGGCCCCATCCCGAGGTCCATTTCAAACATATCATCACTTAGTACTATTGATCTCGGCAACAATAATTTTTCTGGTGAAATCCCAGAAAATTTATTCTATCACCTTCCTAAGTTGGAAAGGTTGAGCTTAACAGATAATGTCTTCTTCGGAGAAATTCCAGCTAGCCTGTTTAATTGCAAGAAGCTGCAGCTTCTGTCGTTATATAACAATAGGTTCAAAGGAAACGTGCCTAGAGGAATTGGGAACTTGACGATGCTTGATTCGTTGTACCTTGGCAAGAACAATTGGCAAGATCAAGATATGGTTGCACATGTGACTGATTTTGGCATTGCGAGACTTTTGGGTGGAGATTCCATGACACGCACTATGACACTGGCTACGATGGGGTATATGGCTCCAGAGTATGGAAGGCAAGGAATTATTTCTAGGCAAGGTGATGTATATAGCTATGGTATTTTGCTTATGGAAACCTTCACTAGAAAGAAGCCCATAGATGAAATGTTCCATGGAGAATTTAACATCAAGCACTGGGTTAAAGATTTGTATCCTGATGCAATAATTGATATTATTGGTGTCCAACCGATGAAAGAAGACAGAGGACAATTAGCTGCCAAGGACTGCTTATTATCAATCATAGGGTTAGCAATGGATTGTTCAGCAGATTCTCCAAATGAAAGGAGAAATATGGGAGATGTCTTAGCTGCATTGATAAAGATCAAGAGCAAGTTTTTGGATGGACCTATAAATCCCATAGCATCTGTTTGA 1272 0.397 MNFQLNGVHYFFVLTVLVLLHCFLARATIAVVEVHNINTDQASLLAFKDHITDDPNDFLAKNWNLDLSNNTFHGSLPSELAQLRRIKFIRLNFNNFSGEIPSWFVFLPKLESLELRYNSFTGNITGSIFNITSLQKLDLTGNNVWGSLPSNFFNSPTLQWVSVYGNQISGPIPRSISNISSLSTIDLGNNNFSGEIPENLFYHLPKLERLSLTDNVFFGEIPASLFNCKKLQLLSLYNNRFKGNVPRGIGNLTMLDSLYLGKNNWQDQDMVAHVTDFGIARLLGGDSMTRTMTLATMGYMAPEYGRQGIISRQGDVYSYGILLMETFTRKKPIDEMFHGEFNIKHWVKDLYPDAIIDIIGVQPMKEDRGQLAAKDCLLSIIGLAMDCSADSPNERRNMGDVLAALIKIKSKFLDGPINPIASV 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01989 423 SMART LRR_typ_2 179 203 IPR003591 -
Bach12g01989 423 SMART LRR_typ_2 204 228 IPR003591 -
Bach12g01989 423 SMART LRR_typ_2 131 155 IPR003591 -
Bach12g01989 423 SUPERFAMILY L domain-like 40 267 - -
Bach12g01989 423 Pfam Protein tyrosine and serine/threonine kinase 268 402 IPR001245 GO:0004672|GO:0006468
Bach12g01989 423 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 59 148 - -
Bach12g01989 423 Gene3D Ribonuclease Inhibitor 11 264 IPR032675 -
Bach12g01989 423 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Bach12g01989 423 Pfam Leucine rich repeat 90 143 IPR001611 GO:0005515
Bach12g01989 423 SUPERFAMILY Protein kinase-like (PK-like) 267 410 IPR011009 -
Bach12g01989 423 ProSiteProfiles Protein kinase domain profile. 91 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01989 423 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 58 260 - -
Bach12g01989 423 Gene3D Transferase(Phosphotransferase) domain 1 265 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01989 Bach-Chr12 18351294 18355016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01989 267 411 Receptor kinase-like Gene Family AT1G08590 28.477 1.09e-16 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach12g01989 PK_Tyr_Ser-Thr 3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01989 - - cill:122278853 326.635