Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01979 ATGACCTTCCAACTCAATGGAGTTCACCACTTCTTTGTTCTAACTGTGTCGGTTTTGCTTCACTGCTTTCTGGCTTATACTACAATTGCAGTGGTTGAAGTACACACTATAAACACCGATCAGGCTTCTCTTCTTGCTTTCAAAGACCATATTACTGATGAACCCAATGATTTTCTTGCCAAAAACTGGTCTGTTAAAACCCCTGTGTGCAATTGGTTTGGCATCACTTGTGCTTCTTCCCACCTTAGAGTTACAGCCCTTAATCTCTCTTACATGGGTCTTGTGGGCACCATTCCACCTCATCTTGGAAACTTATCCTTCCTTAGGAAGTTAGATCTTTCCAACAATACCTTCCATGGTTCTCTTCCTGGTGAATTAGCGCAGTTGCGTAGAATAAAAACCATTGACCTAAAGTTCAATAACTTTAGTGGGGAGATCCCATCATGGTTTGTGTTCTTACCAAAACTTGAAAGATTGAGATTAAACTATAACAGTTTCACAGGTAAAATCAGAGGCTTTATATTTAACATGACTTCACTGCAAAAACTTGATCTTGGTGGTAACAATCTTTGGGGTTGCCTACCATCCAACTTCTTCAACTCCCCTACATCACAACGGGTGAGCGTTTATGATAACCAAATCTCAAGCCCCATCCCAAGGTCCATTTCAAACATATCATCACTTATTTTTATTGATCTCGGCAACAATAATTTTTCTGGTGAAATCCCAGAAAATCTCTTTTATCACCTTCCTAAGTTGGAATGGTTTAGCTTACAAGAAAATGACTTCTTTGGAGAAATTCCAGCTAGCCTGTTTAATTGCAACAAGCTGCAGTTTCTGTCGTTATATAACAATAGACTCAAAGGAAATGTGCCTAGAGAAATTGGGAACTTGACAATGCTTAATTCATTGTACCTTGGCGACAACAATTTGCAAGATCAAGATATGGTTGCACATGTGACTGATTTTGGCATTGCAAGACTTTTGGGTGGAAATTCCATGACACACACTATGACACTGGCTACGATGGGGTATATGGCTCCAGAGTATGGATGGCAAGGAATTATTTCTAGGCAAGGTGATGTATATAGCTATGGTATTTTGCTTATGGAAACCTTCATTGGAAAGAAGCCCACAGATGAAATGTTCCATGGAGAATTTAACATCAAGCACTGGGTTAAAGATTTTTATCCTGATGGAATAATTGATGTTATTGGTGTCCAACTGATGAAAGAAGGCACAGGACAATTAGCTGCCAAGGACTGCTTATTATCAATCATAGGGTTAGCAATGGATTGTTCAGCAGATTCTCCAAATGAAAGGAGAAATATGGGAGATGTCTTAACTGCATTGATAAAGATCAAGATCAAGTTTTTGGATGGACCTATAAATCCCATAGCATCTGTTTGA 1410 0.3901 MTFQLNGVHHFFVLTVSVLLHCFLAYTTIAVVEVHTINTDQASLLAFKDHITDEPNDFLAKNWSVKTPVCNWFGITCASSHLRVTALNLSYMGLVGTIPPHLGNLSFLRKLDLSNNTFHGSLPGELAQLRRIKTIDLKFNNFSGEIPSWFVFLPKLERLRLNYNSFTGKIRGFIFNMTSLQKLDLGGNNLWGCLPSNFFNSPTSQRVSVYDNQISSPIPRSISNISSLIFIDLGNNNFSGEIPENLFYHLPKLEWFSLQENDFFGEIPASLFNCNKLQFLSLYNNRLKGNVPREIGNLTMLNSLYLGDNNLQDQDMVAHVTDFGIARLLGGNSMTHTMTLATMGYMAPEYGWQGIISRQGDVYSYGILLMETFIGKKPTDEMFHGEFNIKHWVKDFYPDGIIDVIGVQLMKEGTGQLAAKDCLLSIIGLAMDCSADSPNERRNMGDVLTALIKIKIKFLDGPINPIASV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01979 469 Pfam Protein tyrosine and serine/threonine kinase 309 449 IPR001245 GO:0004672|GO:0006468
Bach12g01979 469 SUPERFAMILY L domain-like 39 315 - -
Bach12g01979 469 Gene3D Ribonuclease Inhibitor 153 247 IPR032675 -
Bach12g01979 469 ProSiteProfiles Protein kinase domain profile. 96 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01979 469 Gene3D Ribonuclease Inhibitor 39 152 IPR032675 -
Bach12g01979 469 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 176 312 - -
Bach12g01979 469 Pfam Leucine rich repeat 131 190 IPR001611 GO:0005515
Bach12g01979 469 SUPERFAMILY Protein kinase-like (PK-like) 309 457 IPR011009 -
Bach12g01979 469 FunFam Leucine-rich repeat receptor protein kinase EMS1 218 319 - -
Bach12g01979 469 Gene3D Ribonuclease Inhibitor 248 311 IPR032675 -
Bach12g01979 469 Gene3D Transferase(Phosphotransferase) domain 1 312 459 - -
Bach12g01979 469 FunFam Nuclear pore complex protein NUP107 37 196 - -
Bach12g01979 469 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Bach12g01979 469 SMART LRR_typ_2 177 201 IPR003591 -
Bach12g01979 469 SMART LRR_typ_2 105 129 IPR003591 -
Bach12g01979 469 SMART LRR_typ_2 250 274 IPR003591 -
Bach12g01979 469 SMART LRR_typ_2 225 249 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01979 Bach-Chr12 18196506 18200179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01979 309 458 Receptor kinase-like Gene Family AT3G47570 37.975 7.78e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach12g01979 PK_Tyr_Ser-Thr 8.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01979 - K19613 cill:122278853 389.423