Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01964 ATGCCCAACACGTCAACCACAGAACCTGTCTCAAAGAATTACCAGAAGGCAGAGGAGATACTTAAGCTGATAAAGCCTATAATTGATGTTATTGATAATTCTGATTTAGCTTCTGATGCTGTGCTTACTGCTATAATTGAAGAATTGGGTCAGTCTGTTGATGAGTTGAGGGACCTTATTGAGAACTGGCACCTAATGTGTAGCAAAGTTTACTTTGTTATGCAAGTGGAGGCATTGATATCTAGGATTCGGACTTTAGGACTCAAAATGTTCCAGCTGCGGAAGGATTCCCATCAGTGTCTCTCTGATGAATTGAGCTCTGTAGATCTTGAGCACTACATGCAGAAACTCAAGCATTTGGGGCATGAAGAAACATCAACAGTCATTAAAGAAGCAATTAAGGAACAACTTGCAGGTGCAGGGCCTAGTTCGGATGTCCTGGCAAAACTTGCTGATGCTCTGGGGCTGAGGTCCAACCAGGAGGTTCTGATTGAGGCTGTGGCCCTTGTAAAGTTGAAGGAGAATGGTGAACAGGTTGATAAGACTGCTGAAGCTGAATATATTGATCAAATGGTTACTCTTGTAACCCGTATGCATGAGCGTCTTGTTATACTTAAGGAAGCACAGAGCAGTTGCCCCATTCCTGTACCTCGTGAATTTTGCTGTCCTCTCTCTTTGGAATTGATGACAGATCCGGTCATCGTGGCATCAGGGCAAACCTATGAGCTTGCTTTTATTAAGGAATGGATTGATCTTGGGCTTACTGTTTGTCCAAAGACAGTTGATCCTATCAGATCTACAAACTTAAGCCAAGTAGCTTCCCTTCATGGCCCTGTGGAGTCTGGTGTAATTAGGGAATCACCTGTTTATACTCATTCCCGGGGCAACCAAGCATCCTCACCTGAACCAACTTGCTCTCGTTCTCTCAGTTCACCAGCGAAGAACCTAACATCTTCTGGTGGTACCCACCGAGAGGGAACATCACCATTGCATCCCCGTTCAACTTCTGAAGGTTCCTTAAGTGTTGTGGCCAATGCACAGATTTTGGATATTGCAAGAATATCACTGAGAGGTTCTGATGAAAGGTCTGTTAGCTCAGATGAAAAGAGTGTAGATTCAGTTGGCCAACCCTCAATGTCAGCATCTAGAAGGGAATCTTCCCATGTACTTTCCTCTGAACAGTCTCAGATCCATGTTAGAACTGCTTCCAATTCCAGTTCACATTCTAATGGCAATATTCCTCAAGGAACAGAGGGTGATGGAAACAGTGCTTCTCAGGACCCAGGCTATGATAGAGATTCGTCTGGGGAAGTAAATCCAGGAGATGCAACAGCAGAGCTCCGGCTTCTTGCTAAGCACAATATGGATAATCGGATTGTGATTGCAACCTGTGGAGCTATTAACTTGCTAGTTGAGTCGCTCCAATCAAACGATGCAAGGATCCAGGAAAATGCAGTTATAACGCTTCTCAACTTATCAATTAATGATAACAATAAAACTGCAATTGCAAATGCCGGTGCAATTGAGCCTCTGATTCGTGTCCTTGAGACAGGGAGCCTGGAAGCCAAGGAAAATTCGGCTGCCACTCTTTTAAGCTTATCGGTGATTGAGGAAAACAAGGTCAGGATAGGAAGATCTGGGGCAATTAATCCACTAGTTGATTTATTAGGCAATGGAACACCTCGGGGGAGAAAGATGCTGCCGCTGCTTTGTTTGATTTCTCAATATTTTATGAAAACAAGGATCGTATTGTGCAAGCTGGTGCTGTTAAGCACCTTGTAG 1782 0.4394 MPNTSTTEPVSKNYQKAEEILKLIKPIIDVIDNSDLASDAVLTAIIEELGQSVDELRDLIENWHLMCSKVYFVMQVEALISRIRTLGLKMFQLRKDSHQCLSDELSSVDLEHYMQKLKHLGHEETSTVIKEAIKEQLAGAGPSSDVLAKLADALGLRSNQEVLIEAVALVKLKENGEQVDKTAEAEYIDQMVTLVTRMHERLVILKEAQSSCPIPVPREFCCPLSLELMTDPVIVASGQTYELAFIKEWIDLGLTVCPKTVDPIRSTNLSQVASLHGPVESGVIRESPVYTHSRGNQASSPEPTCSRSLSSPAKNLTSSGGTHREGTSPLHPRSTSEGSLSVVANAQILDIARISLRGSDERSVSSDEKSVDSVGQPSMSASRRESSHVLSSEQSQIHVRTASNSSSHSNGNIPQGTEGDGNSASQDPGYDRDSSGEVNPGDATAELRLLAKHNMDNRIVIATCGAINLLVESLQSNDARIQENAVITLLNLSINDNNKTAIANAGAIEPLIRVLETGSLEAKENSAATLLSLSVIEENKVRIGRSGAINPLVDLLGNGTPRGRKMLPLLCLISQYFMKTRIVLCKLVLLSTL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01964 593 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 506 548 IPR000225 GO:0005515
Bach12g01964 593 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 208 275 IPR013083 -
Bach12g01964 593 SUPERFAMILY RING/U-box 208 271 - -
Bach12g01964 593 CDD RING-Ubox_PUB 217 269 IPR045210 -
Bach12g01964 593 SMART Ubox_2 219 282 IPR003613 GO:0004842|GO:0016567
Bach12g01964 593 MobiDBLite consensus disorder prediction 291 341 - -
Bach12g01964 593 Gene3D - 432 573 IPR011989 -
Bach12g01964 593 MobiDBLite consensus disorder prediction 369 432 - -
Bach12g01964 593 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 465 507 IPR000225 GO:0005515
Bach12g01964 593 MobiDBLite consensus disorder prediction 358 441 - -
Bach12g01964 593 Pfam Armadillo/beta-catenin-like repeat 495 534 IPR000225 GO:0005515
Bach12g01964 593 Pfam Armadillo/beta-catenin-like repeat 456 493 IPR000225 GO:0005515
Bach12g01964 593 Pfam U-box domain 216 276 IPR003613 GO:0004842|GO:0016567
Bach12g01964 593 SMART arm_5 495 535 IPR000225 GO:0005515
Bach12g01964 593 SMART arm_5 454 494 IPR000225 GO:0005515
Bach12g01964 593 SUPERFAMILY ARM repeat 443 565 IPR016024 -
Bach12g01964 593 ProSiteProfiles U-box domain profile. 215 260 IPR003613 GO:0004842|GO:0016567
Bach12g01964 593 PANTHER U BOX DOMAIN-CONTAINING 9 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01964 Bach-Chr12 17928256 17934607 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01964 9 565 U-box Gene Family AT5G67340 41.239 4.17e-122 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01964 - - gmx:100813786 596.66