Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01959 ATGGGGAAGAATGAGTTTCTCACACCAAAAGCAATTGCTAATAGAATCAAGGCAAAAGGGCTGCAGAAGCTTAGATGGTACTGCCAGATGTGCCAGAAACAATGTCGGGATGAAAATGGTTTTAAGTGCCATTGTATGAGTGAAGGGCACCAGCGTCAGATGCAAATCTTTGGACAAAACCCACATCGGATTGTTGAGGGCTATTCTGAAGAGTTTGAGAATTTATTTATGGAGCACATGAAGCGCAGTCACCGGTTCAGCCGTGTAGCAGCCACTGTAGTTTACAATGAATATATAAGTCATAGGCACCATGTTCATATGAATTCCACTCAGTGGGCAACACTTACTGAGTTTGTTAAGTACTTGGGTCGAACTGGACAATGTAAGGTTGAAGAAACACCCAAGGGTTGGTTTATTACATACATAGATAGGGATTCAGAGACCCTTTTTAAAGAGAGGATGAAGAATAAGAGAATTAAGGCAGATATGGTGGATGAAGAGAGGCAAGAGAAGATGATCAGGAGGCAGATTGAAAAAGCTGAGATGCTGATGCAGCCAGCTACTTCTGTGTCTGATCTGGAATTGCAAGCTGAGCCTCCAAGAGAATTGAAATTGGAAGATGGACTGAAGGTTGGATTTTCTCTTGGATTGTCAACTAAACCTCCTGTAACCAAGGACAAAAAAGAGACTTCAAGGGTGGTGTTTGATGAGGTTGAGGATGAGAGAAATGAGGAAAGGATTCCTGGAGGCAGTTTGAAGAGGAAAATTGAAAGTGAAGAGAAGAAAGGAGGAAAATCAACTCTGGATGAATTGATGAGGGAGGAAGAGAAGAAAAAGGAGAAAATTAACAGGAAGGACTACTGGTTGCATGAAGGGATTATTGTTAAAGTCATGAGCAAAGCATTGGCGGAGAAGGGCTATTACAAGCAAAAGGGAGTTGTGCGAAAGGTGATAGACAAGTATGTTGGAGAAATAGAAATGCTTGAAAGCAAACATGTGCTTAGAGTCGACCAGGACGAACTTGAAACTGTGATTCCACAAATTGGTGGCCTTGTGAAGATAGTAAATGGGGCATATCGTGGATCAAATGCAAGGTTGTTGGGGGTCGATACAGATCGCTTTTGCGCTAAGGTGCAGATAGAGAAAGGTGCATATGATGGCAGGGTACTGAAGGCAGTAGAGTATGAGGATATTTGTAAGCTTGCCTAG 1209 0.4243 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQIFGQNPHRIVEGYSEEFENLFMEHMKRSHRFSRVAATVVYNEYISHRHHVHMNSTQWATLTEFVKYLGRTGQCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMVDEERQEKMIRRQIEKAEMLMQPATSVSDLELQAEPPRELKLEDGLKVGFSLGLSTKPPVTKDKKETSRVVFDEVEDERNEERIPGGSLKRKIESEEKKGGKSTLDELMREEEKKKEKINRKDYWLHEGIIVKVMSKALAEKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQDELETVIPQIGGLVKIVNGAYRGSNARLLGVDTDRFCAKVQIEKGAYDGRVLKAVEYEDICKLA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01959 402 FunFam DNA/RNA-binding protein KIN17, putative 61 160 - -
Bach12g01959 402 Pfam KN17 SH3-like C-terminal domain 284 337 IPR041330 -
Bach12g01959 402 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Bach12g01959 402 Gene3D - 292 345 - -
Bach12g01959 402 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 402 IPR037321 -
Bach12g01959 402 Coils Coil 163 183 - -
Bach12g01959 402 Gene3D - 60 160 IPR038254 -
Bach12g01959 402 MobiDBLite consensus disorder prediction 239 269 - -
Bach12g01959 402 Coils Coil 265 285 - -
Bach12g01959 402 FunFam DNA/RNA-binding protein kin17-like 292 345 - -
Bach12g01959 402 CDD KOW_KIN17 348 401 IPR041995 -
Bach12g01959 402 Gene3D - 346 402 IPR014722 -
Bach12g01959 402 FunFam DNA/RNA-binding protein KIN17, putative 346 402 - -
Bach12g01959 402 SMART Kin17_mid_2 52 178 IPR019447 -
Bach12g01959 402 SUPERFAMILY beta-beta-alpha zinc fingers 26 66 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01959 Bach-Chr12 17895930 17897138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01959 1 402 C2H2 Transcription Factor Family AT1G55460 70.192 0.0 584