LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach12g01949	ATGAAGCGGTTTGATCCAGGTTTAACTGGGAATATAAGGTACAGGTTCAATTATGATGTCTATGATCGCATATGGTGGTCCGCCGATGGGAATGATGTAGGTCAAAATTGGACACCATACAATGTTTCAATTTCTCCCGGTTACTTAGGGAACAACAGTTTCCAAGTACCTGAGATTGTAATGAGCACCTTGATTACACCAGCAAATGCTAGCGCACCTTTGGAATTTTCCTGGACACCAACAAATAAAAGTAACAAATACTATGTTTATATGCACTTTGCTGAGCTCCAAGAGTTAGCAAAAAATGAGACAAGAGCATTCAACGTCATCCTCAATGGCCAGCTTCAAAATGAAACTATTGTACCAAAGTACCGAAGAGTATACACTTACACTGCCAGGACATCAACTAGTGGAGAAAGATCAGAAATTCTTCTTGAGAGGACTGGGTATTCGACCCTTCCTCCGATCTTAAACGCAATTGAAATTTATAAAGTAAAAGAATTCCCACAATCAGAAACACATCAAGAAGATTTTGATGCAATCACTAGTATCCAGTCAACATATGGGTTGAGAAAAAATTGGCAAGGAGATCCATGCAACCCCATTGAATACTTGTGGGATGGTCTAAGTTGTGCTTATGATGGTTATAATCCTCCAAGAATCACAACTTTGAATTTATCTTCAAGTGAATTGACAGGAAAGATAGATCCGTCCATCTCAAATTTGACTAGGTTGGAGAAGTTGGATTTATCAAACAATAACTTGAATGGGGAAATACCTGCATTTCTGTCTCAATTAGAGTTCCTGAATACCCTAAATCTAGAGAATAATTATCTTACTGGTTCACTTCCCTCGGAATTGGTTGAAAAATCAAAAAGAGGTGCATTGTCTATAAGTGTGAGCCAAAAGCCAAACATCAAGGATAACAACAAAAGCAAGAATTCTACTATTGCAGTAGTAGCATCAGTTTGTGGGGTTTTTATCTTTTTGGCAGTTCTGGCAGTTTTGTTCTGGATCCATAAGAGGACAAAACCCAAACAAAGGAATCCAAATGACACATTAATGAAAATCCAGAAACGACAATATTCATATTCTGATGTCATTAGCATCACCAATAACTTTGATAGAGTAATTGGTAAAGGAGGATTTGGAACAGTTTACCTTGGCTATACTGATGATATTCACGTAGCCGTGAAGATGCTTTCTCCATCATCAGCTCAAGGTTATCAACAATTCCAAGCTGAGGTTAAAATTCTCATGACAGCACATCATAGAAACCTGACTTCCCTAATAGGGTATTGCAACGAAGAAACCAATAAGGGGCTTATCTATGAGTACATGGCTAATGGAAATTTACATGAGCATCTTTCAGGTAAACACAGCAACTCAAAGTTCTTGACTTGGGAAGACCGACTCCGGATATGTGTAGATGCAGCCCAAGGATTGGAGTACCTACATAATGGTTGCAAGCCGCCTATAATACACAGAGACATAAAATCTACAAACATCTTGTTGAATGAAGATTTCCAAGCAAAAATATCAGACTTTGGTCTATCCAAAACTATGAAAACAACAGAGGGGGGAACTCAGTCATCAAGTATTGTAGGTGGTACCCCAGGTTATATGGACCCTGAATTCCACATAACAAACAGAATAACAGATAAGAGTGATGTTTATAGTTTTGGAGTTGTTCTTTTAGAGGTAATCACAAATCAACAACCAGTGATAGCAAGAAATCAGGAGATGATTCACATAAGCCAATGGGTGAACTCCTTGGTTCATAATGGGGATATAGAGAAGATGGTTTATTCCAGGTTACGTGGTGAATTTGACAATAACTCTGCTTGGAAAGCTGTTGAAATAGCAATGGCTTGTGTATCGCCATATTCCAATAGAAGGCCAACTGTGAGTGAGGTAGTGAATGAGCTTAAGTAA	1935	0.384	MKRFDPGLTGNIRYRFNYDVYDRIWWSADGNDVGQNWTPYNVSISPGYLGNNSFQVPEIVMSTLITPANASAPLEFSWTPTNKSNKYYVYMHFAELQELAKNETRAFNVILNGQLQNETIVPKYRRVYTYTARTSTSGERSEILLERTGYSTLPPILNAIEIYKVKEFPQSETHQEDFDAITSIQSTYGLRKNWQGDPCNPIEYLWDGLSCAYDGYNPPRITTLNLSSSELTGKIDPSISNLTRLEKLDLSNNNLNGEIPAFLSQLEFLNTLNLENNYLTGSLPSELVEKSKRGALSISVSQKPNIKDNNKSKNSTIAVVASVCGVFIFLAVLAVLFWIHKRTKPKQRNPNDTLMKIQKRQYSYSDVISITNNFDRVIGKGGFGTVYLGYTDDIHVAVKMLSPSSAQGYQQFQAEVKILMTAHHRNLTSLIGYCNEETNKGLIYEYMANGNLHEHLSGKHSNSKFLTWEDRLRICVDAAQGLEYLHNGCKPPIIHRDIKSTNILLNEDFQAKISDFGLSKTMKTTEGGTQSSSIVGGTPGYMDPEFHITNRITDKSDVYSFGVVLLEVITNQQPVIARNQEMIHISQWVNSLVHNGDIEKMVYSRLRGEFDNNSAWKAVEIAMACVSPYSNRRPTVSEVVNELK	644

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach12g01949	644	FunFam	Leucine-rich repeat receptor-like kinase	178	309	-	-
	Bach12g01949	644	FunFam	receptor-like protein kinase FERONIA	339	446	-	-
	Bach12g01949	644	SUPERFAMILY	Protein kinase-like (PK-like)	348	643	IPR011009	-
	Bach12g01949	644	Gene3D	Ribonuclease Inhibitor	178	300	IPR032675	-
	Bach12g01949	644	ProSiteProfiles	Leucine-rich repeat profile.	244	266	IPR001611	GO:0005515
	Bach12g01949	644	Gene3D	-	14	166	-	-
	Bach12g01949	644	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	493	505	IPR008271	GO:0004672\|GO:0006468
	Bach12g01949	644	Pfam	Leucine Rich Repeat	244	264	IPR001611	GO:0005515
	Bach12g01949	644	Gene3D	Phosphorylase Kinase; domain 1	354	446	-	-
	Bach12g01949	644	Gene3D	Transferase(Phosphotransferase) domain 1	447	644	-	-
	Bach12g01949	644	Pfam	Malectin-like domain	2	165	IPR024788	-
	Bach12g01949	644	ProSitePatterns	Protein kinases ATP-binding region signature.	378	399	IPR017441	GO:0005524
	Bach12g01949	644	CDD	STKc_IRAK	378	644	-	-
	Bach12g01949	644	ProSiteProfiles	Protein kinase domain profile.	372	644	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach12g01949	644	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	447	644	-	-
	Bach12g01949	644	Pfam	Protein tyrosine and serine/threonine kinase	374	643	IPR001245	GO:0004672\|GO:0006468
	Bach12g01949	644	SMART	serkin_6	372	644	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach12g01949	644	SUPERFAMILY	L domain-like	178	288	-	-
	Bach12g01949	644	PANTHER	OS07G0107800 PROTEIN-RELATED	7	644	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach12g01949	Bach-Chr12	17480419	17483895	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach12g01949	1	644	Receptor kinase-like Gene Family	AT2G19210	47.885	0.0	600

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Bach12g01949		PK_Tyr_Ser-Thr	4.8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach12g01949	-		-	gmx:100785345	773.081