Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01948 ATGTCAAAGATCAGTTTCCTCTTAGCTTTGCTTATTGGTCTCGCTCTTGCTGTTCTAAATCAAGCTCAAGATCAATCAGGCTTCATTAGCATAGATTGTGGCCTCCAAGCAAATCGCTTGACTGAGCCACATACAAAAATAAATTATGTTTCAGATGCCAATTTCATAAGTAGTGGAATAAATAATCTAGTATCAGATAATATCAAAAAGTATGCTTGGAATCGACAAAACTCTTGGACTTACAGAAGCTTTCCAGAAGGAAGCAGGAATTGCTATAGAATAAACGTCACTCGTGATTCTAGATATTTGATTCGAGCTGTTTTTTTAAATGGAAATTATAATGGAACAAACAGCATATCATCATTTGATCTTTATTTGGGGCCTAATTTTTGGGATACGGTGCAAATAACTGATGGATCTTCTGCTTCCCATTTTGAGATCATACATAGTCCTGCTCTTGATTATGTACAGATCTGTTTGGTTGACAAAGGTCTTGGTACACCATTTATTAACTCTTTAGAATTGAGGCCTCTCTACAATAATACATACATCACTGATTCTGGATCACTAGCACTTGAGATGAAGCGGTTTGATCCAGGTTTAACTGAGAATATAAGGTTCAGTGATGATGTCTATGATCGCATATGTTGTGCTTATGATGGATATAATCCTCCAAGAATCACAACTTTGAATTTATCTTCAAGTGAATTGACAGGAAAGATAGATCCGTCCATCTCAAATCTGACTAGGTTGGAGAAGTTGGATTTATCAAACAATAACTTAAATGGGGAAATACCTGCATTTCTGTCTCAATTAGAGTTCCTGAATACCCTAAATCTAAAGAATAATTATCTTACTGGTTCACTTCCCTCGGAATTGATTGAAAAATCAAAAAGAGGTGCATTATCTTTAAGTGTGAGCCAAAAGGCAAACATCAAGGATAACAACCAAAGCAAGAATTCTACTATTGCAGTAGTAGCATCAGTTTGTGGGGTTTTTATCTTTCTGGCAGTTCTGGCAGTTTTATTCTGGACCCATAAGAGGACAAAACCCAAACGTATGTCAGTAGAAAGGAATTCAAATGACACATTAATGAAAATCCAGAAACGACAATATTCATATTCTGATGTCATTAGCATCACCAATAACTTTGATAGAGTAATTGGTGAAGGAGGATTTGGAACAGTTTACCTTGGCTATATTGATGATATTCAAGTAGCCGTGAAGATGCTTTCTCCATCATCAGCTCAAGGGTATTGCAATGAAGAAACCAATAAGGGGCTTATCTATGAGTACATGGCCAATGGAAACTTACACGAGCATCTTTCAGGTAAACGCAGCAACTCAAAGTTCTTGACTTGGGAAGACCGACTCCGGATATTTGTAGATGCAGCACAAGGATTGGAGTACCTGCATAATGGTTGCAAACCACCTATAATACACAGAGACATAAAATCTACAAACATCTTGTTGAATGAAGATTTCCAAGCAAAAATATCAGATTTTGGTCTATCCAAAGCTATGAAAACAACAGAGGGGGGAACTCAGTCATCAAGTGTTGTAGGTGGTACCCCAGGTTATATGGACCCTGAATTCTACATAACAAGCAGAATAACAGATAAGAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTAGAGGTAATCACAAATCAACAACCAGTGATAACAAGAAATCGGGAGATGATTCACATAAGCAAATGGGTGAACTCCTTGGTTGAGAATGGGGATATAGAGAAGATCGTTTATTCCAGGTTACGTGGTGAATTTGACAATAACTCTGCTTGGAAAGCTGTTGAAATAGCAATGGCTTGTGTATCGCCATATTCCAATAGAAGGCCAACTATGAGTGAGGTAGTGAATGAGCTGAAGGAATGTTTGACAACAGCACTAGCTCAGACAAACCAAAGCGGTGTTAGTGAACCAGGGTTAGAGGAACAGTTAAAAATGAATCTGTCTATAGATTCTATTCCCATGGCAAGGTAG 2004 0.3752 MSKISFLLALLIGLALAVLNQAQDQSGFISIDCGLQANRLTEPHTKINYVSDANFISSGINNLVSDNIKKYAWNRQNSWTYRSFPEGSRNCYRINVTRDSRYLIRAVFLNGNYNGTNSISSFDLYLGPNFWDTVQITDGSSASHFEIIHSPALDYVQICLVDKGLGTPFINSLELRPLYNNTYITDSGSLALEMKRFDPGLTENIRFSDDVYDRICCAYDGYNPPRITTLNLSSSELTGKIDPSISNLTRLEKLDLSNNNLNGEIPAFLSQLEFLNTLNLKNNYLTGSLPSELIEKSKRGALSLSVSQKANIKDNNQSKNSTIAVVASVCGVFIFLAVLAVLFWTHKRTKPKRMSVERNSNDTLMKIQKRQYSYSDVISITNNFDRVIGEGGFGTVYLGYIDDIQVAVKMLSPSSAQGYCNEETNKGLIYEYMANGNLHEHLSGKRSNSKFLTWEDRLRIFVDAAQGLEYLHNGCKPPIIHRDIKSTNILLNEDFQAKISDFGLSKAMKTTEGGTQSSSVVGGTPGYMDPEFYITSRITDKSDVYSFGVVLLEVITNQQPVITRNREMIHISKWVNSLVENGDIEKIVYSRLRGEFDNNSAWKAVEIAMACVSPYSNRRPTMSEVVNELKECLTTALAQTNQSGVSEPGLEEQLKMNLSIDSIPMAR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01948 667 FunFam Leucine-rich repeat receptor-like kinase 207 315 - -
Bach12g01948 667 ProSitePatterns Protein kinases ATP-binding region signature. 388 409 IPR017441 GO:0005524
Bach12g01948 667 ProSiteProfiles Leucine-rich repeat profile. 250 272 IPR001611 GO:0005515
Bach12g01948 667 Gene3D Ribonuclease Inhibitor 196 305 IPR032675 -
Bach12g01948 667 SUPERFAMILY L domain-like 202 295 - -
Bach12g01948 667 SUPERFAMILY Protein kinase-like (PK-like) 360 629 IPR011009 -
Bach12g01948 667 ProSiteProfiles Protein kinase domain profile. 382 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01948 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Bach12g01948 667 Pfam Protein tyrosine and serine/threonine kinase 417 629 IPR001245 GO:0004672|GO:0006468
Bach12g01948 667 PANTHER OS07G0107800 PROTEIN-RELATED 217 633 - -
Bach12g01948 667 Gene3D Transferase(Phosphotransferase) domain 1 433 648 - -
Bach12g01948 667 SMART serkin_6 382 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01948 667 Pfam Malectin-like domain 31 223 IPR024788 -
Bach12g01948 667 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 433 642 - -
Bach12g01948 667 Gene3D Phosphorylase Kinase; domain 1 354 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01948 Bach-Chr12 17359490 17363817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01948 212 647 Receptor kinase-like Gene Family AT1G51880 46.089 5.91e-133 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bach12g01948 PK_Tyr_Ser-Thr 6.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01948 - - gmx:100781785 522.702