Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01947 ATGTCAAAGAGTTTCCTCTTTGCTTTGATACTTGGTCTAGCTCTTCCTGATCTTATCCCAGCTCAAGATCAATCAGGTCTTGGTACACCATTTATTAACTCTTTAGAATTGAGGCCTCTCTACGATAATACATACATCACTGATTCTGGATCACTAGCACTCGAGATGAAGCGGTTTGATCCAGGTAAACACAGCAACTCAAAGTTCTTGACTTGGGAAGACCGACTCCGGATATGTGTAGATGCAGGCCAAGGATTGGAGTACCTACATAATGGTTGCAAGCCGCCTATAATACACAGAGACATAAAATCTACAAACATCTTGTTGAATGAAGATTTCCAAGCAAAAATATCAGACTTTGGTCTATCCAAAACTATGAAAACAACAGAGGGGGGAAGTCAGTCATCAAGTATTGTAGGTGGTACCCTAGGTTATATGGACCCTGAATTCCACATAACAAACAGAATAACAGATAAGAGTGATGTTTATAGTTTTGGAGTTATTCTTTTAGAGGTAATCACAAATCAACAACCAGTGATGGCAAGAAATCAGGAGATGATTCACATAAGCCAATGGGTGAACTCCTTGGTTCATAATGGGGATATAGAGAAGATGGTTTATTCCAGGTTACGTGGTGAATTTGACAATAACTCTGCTTGGAAAGCTGTTGAAATAGCAATGGCTTGTGTATCGCCATATTCCAATAGAAGGCCAACTGTGAGTGAGGTAGTGAATGAGCTTAAGGAATGTTTGACAACAGCACTACGTCAGACAAACCAAAGTAGTGTTAGTGAAGCAGGGTTAGAGGAACAGTTAAAAATGAATCTGTCTATAGATTCTATTCCCATGGCAAGGTAG 858 0.3974 MSKSFLFALILGLALPDLIPAQDQSGLGTPFINSLELRPLYDNTYITDSGSLALEMKRFDPGKHSNSKFLTWEDRLRICVDAGQGLEYLHNGCKPPIIHRDIKSTNILLNEDFQAKISDFGLSKTMKTTEGGSQSSSIVGGTLGYMDPEFHITNRITDKSDVYSFGVILLEVITNQQPVMARNQEMIHISQWVNSLVHNGDIEKMVYSRLRGEFDNNSAWKAVEIAMACVSPYSNRRPTVSEVVNELKECLTTALRQTNQSSVSEAGLEEQLKMNLSIDSIPMAR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01947 285 Pfam Protein kinase domain 68 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01947 285 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01947 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
Bach12g01947 285 PANTHER OS07G0107800 PROTEIN-RELATED 68 257 - -
Bach12g01947 285 SMART serkin_6 21 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01947 285 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 48 260 - -
Bach12g01947 285 Pfam Malectin-like domain 26 65 IPR024788 -
Bach12g01947 285 SUPERFAMILY Protein kinase-like (PK-like) 70 247 IPR011009 -
Bach12g01947 285 Gene3D Transferase(Phosphotransferase) domain 1 52 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01947 Bach-Chr12 17313104 17317250 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01947 45 285 Receptor kinase-like Gene Family AT1G51890 46.988 4.33e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bach12g01947 Pkinase 4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01947 - - gmx:100818475 285.419