Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01945 ATGTCAAACATCAGTTTCCTCTTAGCTTTGCTTATTGGTCTCGCTCTTGCTGATCTAAATCAAGCTCAAGATCAATCAGGCTTCATTAGCATAGATTGTGGCCTCCATGCAAATACCGGCTATACCTCACCATATACAAAAATAGATTATGTTTCAGATGCCAGTTTCATAAGAAGTGGAATAAATTATCAATCACCAGAAGAAATCAAAAAGAACTTTCCAGAACGACAAAACTTTTGGACTTACAGAAGCTTTCCAGAAGGAAGCAGGAATTGCTATAGAATAAACGTCACTCGTGATTCTAGATATTTGATTCGAGCTGTTTTTGTGTATGGAAATTATAATGGAACAAACGGCCATCCATCATTTGATCTTCATTTGGGGCCTAATTTTTGGGATACAGTGCAAATAACTGATGGATCTAATCCTTACCATTTTGAGATCATACATAGTCCTGCTCTTGCTTATGTACAGATCTGTTTGGTTAACAAAGGTGTTGGTACACCATTTATTAACTCTTTAGAATTGAGGCCTCTCTACAATAATACATACATTACTGATTCTGGATCACTAGCACTCGAGATGAAGCGGTTTGATCCAGGTAAACGCAGCAACTCAAAGTTCTTGACTTGGGAAGACCGACTCAGGATATTTGTAGATGCAGCACAAGGATTGGAGTACCTGCATAATGGTTGCAAGCCACCTATAATACACAGAGACATAAAATCTACAAATATTTTGTTGAATGAAGATTTCCAAGCAAAAATATCAGATTTTGGTCTATCCAAAGCTATGAAAACAACAGAGGAGGGAACTCAGTCATCAAGTGTTGTAGGCGGTACCCCAGGTTATATGGACCCTGAATTCCACATAAACAGAATAACAGATAAGAGTGATATTTATAGCTTTGGAGTTGTTCTTTTAGAGGTAATCACAAATCAACAACCAGTGATAGCAAGAAATCAGGAGATGATTCACCTAAGCCAATGGGTGAACTCCTTGGTTGAGAATGGGGATATAGAGAAGATCGTTTATTCCAGGTTGCGTGGTGAATTTGACAATAACTCTGCTTGGAAAGCTGTTGAAATAGCAATGGCTTGTGTATCGCCATATTCCAATAGAAGGCCAACTATGAGTGAGGTAGTGAATGAGCTTAAGGAATGTTTGACAACAGCACTACGTCAGACAAACCAAAGCGGTGTTAGTGAAGCAGGGTCTATAGATTCTATTCCCATGGCAAGGTAG 1245 0.3871 MSNISFLLALLIGLALADLNQAQDQSGFISIDCGLHANTGYTSPYTKIDYVSDASFIRSGINYQSPEEIKKNFPERQNFWTYRSFPEGSRNCYRINVTRDSRYLIRAVFVYGNYNGTNGHPSFDLHLGPNFWDTVQITDGSNPYHFEIIHSPALAYVQICLVNKGVGTPFINSLELRPLYNNTYITDSGSLALEMKRFDPGKRSNSKFLTWEDRLRIFVDAAQGLEYLHNGCKPPIIHRDIKSTNILLNEDFQAKISDFGLSKAMKTTEEGTQSSSVVGGTPGYMDPEFHINRITDKSDIYSFGVVLLEVITNQQPVIARNQEMIHLSQWVNSLVENGDIEKIVYSRLRGEFDNNSAWKAVEIAMACVSPYSNRRPTMSEVVNELKECLTTALRQTNQSGVSEAGSIDSIPMAR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01945 414 SUPERFAMILY Protein kinase-like (PK-like) 209 385 IPR011009 -
Bach12g01945 414 PANTHER OS07G0107800 PROTEIN-RELATED 207 389 - -
Bach12g01945 414 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 188 398 - -
Bach12g01945 414 Pfam Protein kinase domain 207 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01945 414 Gene3D Transferase(Phosphotransferase) domain 1 189 407 - -
Bach12g01945 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Bach12g01945 414 ProSiteProfiles Protein kinase domain profile. 79 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01945 414 Pfam Malectin-like domain 31 206 IPR024788 -
Bach12g01945 414 SMART serkin_6 93 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01945 Bach-Chr12 17138650 17142869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01945 194 413 Receptor kinase-like Gene Family AT1G51800 52.941 1.15e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bach12g01945 Pkinase 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01945 - - gmx:100781785 278.1