Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01940 ATGCTCTGCTTTTCATTTCGTCTTCTTCCTCTTCTTATCTCTTTCGGCCAATTCAGGTGTAGCAATCAGAGTCCCCCCTCGGCTACGAACGGTGTGGCGACGACCCCAGGTGCCAACCAGTTTGTGACAACGTCGTTGTATGTCGGGGATCTTGACCAGAATGTAAACGATTCGCAGCTTTACGATCTCTTCAACCAAGTCGGGCAAGTTGTTTCTGTTCAGGTCTGTAGGGACTTGACAAGCCGTCGATCCCTTGGTTACGGTTATGTTAATTACAGTAACCCTCAGGATGAGAGACTACAAATGCCAACTGACTGCCTTCTGAAAATCAAAGAATCTGCGGCAAGAGCAATTGATATGCTGAATTTCACTCCACTGAACGGCAAACCAATTAGGATTATGTATTCTCATCGAGATCCTAGTATTCGGAAGAGTAGAACTACAAATATATTTATTAAGAATTTGGATAAGGCCATTGACCACAAAGCCTTACATGAGACTTTTTTTGCTTTTGGAACTATTATTTCTTGCAAGATAGCAACTGATGCTTCTGGCCATTCTAAAGGCTATGGGTTCGTACAATTTGACAATGAAGGTTCTACACAGAAATACTTTTTCTCTGAATTCTATATGGTATCTGTGATCCTCCATTGA 654 0.422 MLCFSFRLLPLLISFGQFRCSNQSPPSATNGVATTPGANQFVTTSLYVGDLDQNVNDSQLYDLFNQVGQVVSVQVCRDLTSRRSLGYGYVNYSNPQDERLQMPTDCLLKIKESAARAIDMLNFTPLNGKPIRIMYSHRDPSIRKSRTTNIFIKNLDKAIDHKALHETFFAFGTIISCKIATDASGHSKGYGFVQFDNEGSTQKYFFSEFYMVSVILH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01940 217 Gene3D - 142 200 IPR012677 -
Bach12g01940 217 Gene3D - 17 141 IPR012677 -
Bach12g01940 217 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 148 217 IPR000504 GO:0003723
Bach12g01940 217 PANTHER RNA BINDING PROTEIN 112 203 - -
Bach12g01940 217 SUPERFAMILY RNA-binding domain, RBD 44 204 IPR035979 GO:0003676
Bach12g01940 217 SMART rrm1_1 45 134 IPR000504 GO:0003723
Bach12g01940 217 SMART rrm1_1 149 215 IPR000504 GO:0003723
Bach12g01940 217 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46 97 IPR000504 GO:0003723
Bach12g01940 217 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 150 203 IPR000504 GO:0003723
Bach12g01940 217 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 138 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01940 Bach-Chr12 16991926 16992909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01940 15 203 Eukaryotic Initiation Factors Gene Family AT4G34110 58.462 1.19e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01940 K13126 - mof:131161685 269.24