Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01893 GTTTTGCCCAAATCTTGAAGGGTAGCGTTTCCTTCCTCTGATATTTTCTGGGAATTTGATGGAAAATGCAGGTCCTGAGCTTCAAAATGATGGGGATTTCGTGTCAGATCCTGCTTATCATCTGGAGACAAGTACTGGAGATGAAAAAGAAGAGGCCTCCTTGATTCAGCAGTCCAGACGGCCAAGCCTCTCCTCTTTGCAAATACCAGCAAGGTCACTAGACAGTACTTCGTCAAGTCCAGGTTCCTCTAGAGGAGGACTGCCCCCAAGGCCAAATTCTGCCAAAGTCAAGTCTTCTTCTATGAGAAGCTTACTTGCTCAGATGAGCTTCAAGACAAAAGATAACTCCCAAGACTGTGAAAGGACAGTCCTTATTGTTCCTGATACTCCCCAATCAGCTGGTCCTGTGGATCAGCCTTCAACTTCAAGGTCCCTTTCTCTTAATAAGGTTTTATTACCTTCATCCAGAAAAGCAACACATTCACTACCAGTTTCACCAACCATGAATTCAGGTGCAGAGATTGTGCATGGAAGACACCTATTGAGTGTTTTGGATTCAAGTAAAACGGATGTTAAGAAGCATATCACTCGATCATTTTCAGTTCCAGTTAATGTCAGAAACAGTAGTTTAAGGCGTACAAGTTCTAGTAGTTTGATCCGTGTGATTTCAGCAAGATCACATGCTGCAGTAGTTGAAGGTGCTTCAAGTGATATTGCCCCAGCACCCGAGATTGTCATCAAAAATGCTGCTGAAGATATCCCAGAGGAAGAAGCAGTTTGTAGGATTTGTTTGGTGGAGCTTCGGGAAGGAGGGGATACTCTTAAGATGGAGTGCAGCTGTAGAGGTGAGCTTGCTCTTGCTCACCAAGCATGTGCAGTGAAGTGGTTCAGTATCAAGGGAAACAAGACCTGTGATGTATGCAAGCAGGATGTCCAAAACCTCCCGGTAACACTCTTGAAAATCCGTAATCCTCCCAGAAGGTCATCAAGTACAGCTGAACATAGAGATGTCACTTACTTCAGGATTTGGCAGGTTGTACCCACACTTGTATTGGTTAGCATACTAGCTTACTTCTGCTTTTTGGAGCAACTTCTGGTTTCAGATTTGGGTGTTCGTGCTCTAGCCATTTCATTGCCTTTCTCCTGCGGTTTAGGCCTCCTTTCATCTTTGATTGCTTCAACTATGGTGAGCGGAAGTTACATATGGGCTTATGCTTGTTTCCAGTTTGCAATTATCATCCTGTTTGCTCATCTGTTTTATACAATACTTAATGTGAGTCCGATTCTGTCAGTTCTTCTTTCCTCATTCACTGGATTTGGGATTGCAATCAGCATGAATACTCTTCTTGTGGAGTATATTAGATGGAGAACTAGCAGGCATCTTCAATCTTTGGATCATGCTGATGTACGACAGCAGCCAGAACAGCATCATCAACGGCAAAGACAACAGAGAGAGCAACATCAATGACAGTACGTTGATTACTTATTTGTTTGTTTTAAGTTGGTATCTGCTAAGCTTTGGGCATTTGCGGTTGAATCCAACATGAACAGGAATTTTTTAGAATGGAAGGTTTGTGTTAAATACATTTTGGGAAGTGTATTTTGACTGTTTTTTGTGCTCACTGAGCTTGAGGTGTTGTAAATTACTATGTAAATCAATGTATGTTTGATGAGTTGATGTAAAACATCCACAATCTTACATCTACAAACACTATGAACTGTGGACACTTAAATCCAAGTTCAAATGATCATATTTTTGGTCAAGTTTGAATTTTGCCACATACACAGTTGGGAAAAAGTCCAAAAACACCCTCTAAACTTTGCATGATGTGCACTTTACTTCTA 1845 0.4157 MENAGPELQNDGDFVSDPAYHLETSTGDEKEEASLIQQSRRPSLSSLQIPARSLDSTSSSPGSSRGGLPPRPNSAKVKSSSMRSLLAQMSFKTKDNSQDCERTVLIVPDTPQSAGPVDQPSTSRSLSLNKVLLPSSRKATHSLPVSPTMNSGAEIVHGRHLLSVLDSSKTDVKKHITRSFSVPVNVRNSSLRRTSSSSLIRVISARSHAAVVEGASSDIAPAPEIVIKNAAEDIPEEEAVCRICLVELREGGDTLKMECSCRGELALAHQACAVKWFSIKGNKTCDVCKQDVQNLPVTLLKIRNPPRRSSSTAEHRDVTYFRIWQVVPTLVLVSILAYFCFLEQLLVSDLGVRALAISLPFSCGLGLLSSLIASTMVSGSYIWAYACFQFAIIILFAHLFYTILNVSPILSVLLSSFTGFGIAISMNTLLVEYIRWRTSRHLQSLDHADVRQQPEQHHQRQRQQREQHQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01893 469 CDD RING_CH-C4HC3_MARCH 241 289 - -
Bach12g01893 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 227 296 IPR013083 -
Bach12g01893 469 MobiDBLite consensus disorder prediction 449 469 - -
Bach12g01893 469 MobiDBLite consensus disorder prediction 37 67 - -
Bach12g01893 469 PANTHER OS02G0165000 PROTEIN 32 455 - -
Bach12g01893 469 ProSiteProfiles Zinc finger RING-CH-type profile. 233 295 IPR011016 GO:0008270
Bach12g01893 469 SMART ringv_2 240 289 IPR011016 GO:0008270
Bach12g01893 469 Pfam RING-variant domain 241 288 IPR011016 GO:0008270
Bach12g01893 469 MobiDBLite consensus disorder prediction 1 83 - -
Bach12g01893 469 SUPERFAMILY RING/U-box 237 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01893 Bach-Chr12 15869243 15881342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01893 235 339 C3H Transcription Factor Family AT2G37950 30.508 2.39e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01893 - - qsa:O6P43_014398 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01893 12 15869243 15881342 Bach3g00342 3 10129163 10137740 BWGD