Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01863 ATGGAAAATATCTCCATCTCAGACCCACTCAACTGGGGGGCGGCGGCGGAGTCACTCAAGGGCAGCCACTTAGATGAAGTCAAACGCATGGTGGCGGAGTACCGGAATCCGGTCATCCATCTCGGCGGTGAGGTGCTGACGATCTCGCAGGTGGCTGCCGTTGCAAAACGTAACACACAAGTCAGGGTTGAGCTATTGGAATCTGCAAGAGCAAGGGTTGAGGCTAGTGTTGAGTGGATATTGGAGAGCATTGAGAAAGGCATGGCAATTTATGGTGTTAACACTGGGTTTGGTGCTGCCTCAAATAGGCGAACCAATCAAGCTGTTGCCCTTCAAAAGGAGATGGCTAGACTATTGAACTCCGGAATGTTTGGTAAGGGATCGGAGTTATCCCATACTCTTACTCAATCTGCAACAAGAGCAGCCATGCTTGTGAGGGTAAACACCCTTCTCCAAGGCTACTCGGGCATTAGATTTGAGATCTTAGAAGCCATCATAAAATTCCTCAACAGCAATATCACTCCCTTAGTGCCCTTACGTGGGTCAATCACTGCTTCTGGTGATCTCATTCCTCTTTCCTACATTGTTGCATTGCTAATTGGAAGGCGAAACTCGAAATCTATAGGACCCGCTGGAGATACCTTGAATGCCAAGGAAGCTTTCCATTTAGCTGGTATCAATTCTGGGTTCTTTGAACTGCAGCCAAAAGAAGGAGTTGCCCTAGTTAATGGCACTGCTGTTGGATCTGGCTTAGCTTCTATTGTTCTTTTTGAGGCGAATATATTAGCATTGCTGTCAGAAATTCTATCAGCAATTTTTTCTGAAGTAATGCAGGGGAAGCCTGATTTCACACACCATCTGATTCATAAGCTGAAGTACCACCCTGGTCAAATAGAAGCTGCTGCTATTATAGAACACATTTTAGAAGGAAGCTTGTATGTCAAGGAAGCTATGAAGATAGATCCAGCACTGCAGAAGCCTAAGAAAGATCGTTATGCCCTTGTAACTTCCCCTCAATGGCTTGGACCACAGGTTGAGGTTATTCGATTTTCGACTAAATCAATCGAAAGGGAGATAAACTCAGTGAATGATAATCCTCTTATTGATGTTACAAGGAATAAGGTCTTAAATGGAGGTAATTTTCAAGGCACACCAATTGGAGTCTCAATGGATAACACACGTTTAGCCATTGCTTCAATTGGGAAACTTGTGTTTGCACAGTTCACTGAGCTTGTCAATGACTCTTACAATAATGGGTTGCCATCAAATCTCTCTGCTGGTAGAAACCCAAGTTTGGATTATGGATTCAAGGCAGCTGAAGTTGCCATGGCTTCTTATTGTTCTGAGCTTCAATATCTCGCGAACCCCGTAACAAGCCACGTGCAAAGTTGTGAGCAGCACAACCAAGATGTGAATTCTCTGGGTTTAATTTCGGCAAGAAAAACTGAGGAAGCTGTTGATATCTTGAAGCTCATGTGTTCCACATTTCTGGTTGCACTATGCCAAGCAATTGACTTGAGGCATTTAGGGGAAAATTTGAAGAGTGCAGTGAAGGAAACTGTAAGCCAAGTTGCAAAGAAGACTCTAAACAAAGGATACAATGAAGAAATTAACCCATTTAGATCATGTGAGGAAGAGCTGGTGAAGGTTGTTGAAAAGGAATATGTATTTTCCTACATTGATGATCCTTGCAATGCTGCATACCCATTGATGCCAAAACTGAAGCAAGTACTTTATGAGCAGGCACACAGGAATGCCATAAATGAGAAGAATATTGGAAGCACTTCACTTTTTGAGAAGATTGAAGCTTTTGAGGAGGAACTGAAGTCTCTGTTACCAAAGGAAGTGGAAAGTGCAAGGGTGGCATATGAGAATGGGAATCCAGTAATTGCAAACAAAATCAAGGAGTGTAGGTCTTATCCACTGTACAAATTTGCAAGGGAGGAGTTGGGAACTGAACTGCTGACTGGAGAAAAGATCAATTCAGCAGATGAGGACTTTGATAAAGTGTTTGAAGCAATATGTGAAGGAAAGATCATTGATCCAATTCTAGAATGCCTTGCAGATTGGAATGGAGCCCCCTGCCCAATCTAG 2094 0.4327 MENISISDPLNWGAAAESLKGSHLDEVKRMVAEYRNPVIHLGGEVLTISQVAAVAKRNTQVRVELLESARARVEASVEWILESIEKGMAIYGVNTGFGAASNRRTNQAVALQKEMARLLNSGMFGKGSELSHTLTQSATRAAMLVRVNTLLQGYSGIRFEILEAIIKFLNSNITPLVPLRGSITASGDLIPLSYIVALLIGRRNSKSIGPAGDTLNAKEAFHLAGINSGFFELQPKEGVALVNGTAVGSGLASIVLFEANILALLSEILSAIFSEVMQGKPDFTHHLIHKLKYHPGQIEAAAIIEHILEGSLYVKEAMKIDPALQKPKKDRYALVTSPQWLGPQVEVIRFSTKSIEREINSVNDNPLIDVTRNKVLNGGNFQGTPIGVSMDNTRLAIASIGKLVFAQFTELVNDSYNNGLPSNLSAGRNPSLDYGFKAAEVAMASYCSELQYLANPVTSHVQSCEQHNQDVNSLGLISARKTEEAVDILKLMCSTFLVALCQAIDLRHLGENLKSAVKETVSQVAKKTLNKGYNEEINPFRSCEEELVKVVEKEYVFSYIDDPCNAAYPLMPKLKQVLYEQAHRNAINEKNIGSTSLFEKIEAFEEELKSLLPKEVESARVAYENGNPVIANKIKECRSYPLYKFAREELGTELLTGEKINSADEDFDKVFEAICEGKIIDPILECLADWNGAPCPI 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01863 697 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 181 197 IPR022313 GO:0016841
Bach12g01863 697 Pfam Aromatic amino acid lyase 46 520 IPR001106 -
Bach12g01863 697 Gene3D - 2 245 IPR024083 -
Bach12g01863 697 Gene3D Fumarase/aspartase (Central domain) 246 693 - -
Bach12g01863 697 NCBIfam phenylalanine ammonia-lyase 8 687 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bach12g01863 697 FunFam Phenylalanine ammonia-lyase 1 245 - -
Bach12g01863 697 CDD PAL-HAL 46 507 IPR001106 -
Bach12g01863 697 SUPERFAMILY L-aspartase-like 8 697 IPR008948 GO:0003824
Bach12g01863 697 PANTHER HISTIDINE AMMONIA-LYASE 8 697 IPR001106 -
Bach12g01863 697 Gene3D - 510 632 IPR023144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01863 Bach-Chr12 15310419 15312977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01863 4 697 Monolignol Biosynthesis Gene Families AT2G37040 72.884 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01863 K10775 - gmx:100787872 1042.34