Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01835 TTTGCCTCTCTGTTGTTTAGAATCAGATTACCCAACACCGCATACAGTGAAAGAGAGACAGAGAGAGAATGGGAGAGGGAGAAGATAGCGTAAAAGGAGAAGAAGTTCAAGAGCATGAAGAAATTGATACATGGAACCAGAAAAAACAAACCCAAATCCTTCAATTATCGGAGAAGCTCATCAATGGCGACCTTCACTCCAAAATAGAAGCTGCCAAACAAATCAGAAAGCTCGTTCGAAAGTCTTCAGCTAAAACCCGCTCGAAATTCGCATCTGCTGGTGTCATTCAACCCCTTATTTTCATGCTCTCTTCCTTCAACCTCCAAGCCCGAGAAGCTGCTCTCCTCGCACTCCTCAATCTCGCTGTACGCAACGAACGAAACAAGGTCAAAATAGTGACAGCGGGTGCCGTTCCTCCTCTTGTGGAGCTCCTCAAGATGCAAAATAGCAGTATCCCGGAATTAGCCACTGCTGCAATCTTGACGCTATCAGCTGCTGCGCCAAACAAACCCACCATTGTGGCTTCTGGAGCTGCACCACTTCTTGTCCAGATCCTTAACTCTGGAAGTGTTCAAGGAAAAGTTGATGCTGTTACAGCCCTCCATAATCTTTCCACTAGCACTGAGAAATTCTCTGAACTTCTTGATGCTAGGGCAGTTGCTCCTCTTATCAACCTCCTTAAAGAGTGCAAGAAGTACTCCAAATTTGCTGAAAAAGCTACCGCACTGCTTGAAATCCTATCCAACTCTGAAGAGGGACGAATTGCTATCACAAATGTAGATGGTGGAATTTTAACCTTAGTAGAGACAGTTGAAGATGGATCACTAGTCAGCACAGAGCACGCAGTTGGAGCTTTGCTATCATTATGTCTTAGCTGCAGAGATAAATACAGGGAACTAATTCTCAAAGAAGGGGCAATCCCAGGCCTTTTGCGGCTCACTGTGGAAGGAACAGCTGAAGCTCAGGATAGAGCCCGTGCGCTTCTAGATTTGCTCAGAGATTCTCCCCCGGAAAAAAGATTAGCCTCCACTGTTTTGAAGAAAATTGTTTATGACATTGCTGAACGAGTGGATGGAGCTGATAAAGCTGCTGAAACTGCCAAGCGGTTATGGCAAGATATGGTTCAAAGAAGTATGGAACACAGTATGAACTGCATTGAGCACAGGGCTGCATCTTGTACGCCATCAGCGATTTCACAAACTTGATGAATACCCTTTTGGCTCAACAAGCAGCCTTCCATGACTAAATTTTAATCTGTTCATGTGGTTGTCTGACAAGTCAATGCTTTTTATGATTTGAGTCAGATAAGATTTAAAGCGAGTCTAAACTGCCGTACATAACATGACTAATCATGTTTACCAAAATGACTTGAGATCTATTGACCTTATGACTGATGAATACTTTGTATATCTTGACTTGGATAATGGATACTGT 1434 0.4351 MGEGEDSVKGEEVQEHEEIDTWNQKKQTQILQLSEKLINGDLHSKIEAAKQIRKLVRKSSAKTRSKFASAGVIQPLIFMLSSFNLQAREAALLALLNLAVRNERNKVKIVTAGAVPPLVELLKMQNSSIPELATAAILTLSAAAPNKPTIVASGAAPLLVQILNSGSVQGKVDAVTALHNLSTSTEKFSELLDARAVAPLINLLKECKKYSKFAEKATALLEILSNSEEGRIAITNVDGGILTLVETVEDGSLVSTEHAVGALLSLCLSCRDKYRELILKEGAIPGLLRLTVEGTAEAQDRARALLDLLRDSPPEKRLASTVLKKIVYDIAERVDGADKAAETAKRLWQDMVQRSMEHSMNCIEHRAASCTPSAISQT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01835 378 Gene3D - 28 209 IPR011989 -
Bach12g01835 378 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 113 155 IPR000225 GO:0005515
Bach12g01835 378 SMART arm_5 227 268 IPR000225 GO:0005515
Bach12g01835 378 SMART arm_5 143 183 IPR000225 GO:0005515
Bach12g01835 378 SMART arm_5 184 226 IPR000225 GO:0005515
Bach12g01835 378 SMART arm_5 60 100 IPR000225 GO:0005515
Bach12g01835 378 SMART arm_5 101 142 IPR000225 GO:0005515
Bach12g01835 378 MobiDBLite consensus disorder prediction 1 20 - -
Bach12g01835 378 Pfam Armadillo/beta-catenin-like repeat 145 182 IPR000225 GO:0005515
Bach12g01835 378 Pfam Armadillo/beta-catenin-like repeat 102 137 IPR000225 GO:0005515
Bach12g01835 378 SUPERFAMILY ARM repeat 33 323 IPR016024 -
Bach12g01835 378 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 195 239 IPR000225 GO:0005515
Bach12g01835 378 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 71 113 IPR000225 GO:0005515
Bach12g01835 378 FunFam U-box domain-containing protein 4 12 369 - -
Bach12g01835 378 PANTHER U BOX DOMAIN-CONTAINING 29 311 - -
Bach12g01835 378 Gene3D - 210 335 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01835 Bach-Chr12 14888529 14892951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01835 17 311 U-box Gene Family AT3G54790 37.838 8.30e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01835 K08332 - qsu:112003922 539.65