Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01831 ATGGCTGAAGCTTCAAGAATTCTATACTCCACTCTCATTCCTAGTTTCAGTCCAACCCAGAGAACTCATGTGGGTCAGCGTCAACTTAGTTTCTCACGCAGGCCCCACGTTCATTGTTCAGTTTCTGCCAGTGATGCCACCAGAACTGCTGCTACGGAAACTATACCATGGGGCTGTGAGATTGATTCTTTAGAAAACGCTTCTGCTTTGCAGAAATGGTTATCTAACTCAGGGCTCCCACCCCAGAAGATGGCCATAGAAAAAGTAAATGTAGGAGAGAGAGGTCTTGTTGCATTGAAGAATATAAGGAAGGGAGAGAAATTGCTCTTTGTGCCTCCCTCATTAGTCATCACTGCAGATTCTGAATGGAGCTGCCCAGAAGCTGGTGAGATATTGAAAAGGAATTCAGTGCCGGATTGGCCATTGATTGCAACTTACCTCATTAATGAAGCTAGTCTAATGAAATCTTCAAGATGGAACGATTATATATCAGCTTTACCTAGGCAGCCATATTCACTTCTTTACTGGTCACAAGCAGAACTAGATCGATATTTGGAAGCTTCACAGATTAGGGAGAGAGCAATTGAAAGGATTGATAATGTTATTGGAACATACAATGATTTGAGGCTCAGAATATTTTCCAAATACCCCAGTTTATTTCCTGAAGAGGTGTTCAACATAGAGACCTTCAAATGGTCATTTGGCATTCTTTTCTCTCGTTTGGTTCGCTTATCCTCAATGGACGGAAAGGTTGCTTTGGTTCCATGGGCAGATATGCTGAATCATAGTTGTGATGTTGAAACGTTTTTGGATTATGACAAATCATCAAAAGGAATTGTGTTTACTACTGATCAGCCCTATCAACCAGGTGAGCAGGTCTTCATTTCATATGGCAAGAAATCTAATGGAGAGCTTCTGTTATCTTATGGGTTTGTTCCAAAGGAAGGTACCAATCCTAATGATTCAGTTGAGTTACCACTGTCTCTTCAAAAATCTGACAAGTGCTATGCGGAGAAGTTGGGACTCTTGAAAAAGCACGGTTTGTCAGCATCTCAGTGCTTCCCTGTGCAAATTACTGGATGGCCGTTGGAATTAATGGCATATGCTTATTTAGCTGTAAGCCCTCCAAGCATGAGAGGGCAATTTGAAGAGATGGCTGCTGTGGCATCAAACAAAGCGACCACCAAGAAAGATTTGAGATATCCTGAAATAGAGGAGCAAGCATTGCAATTCATACTAGACAGCTGCGAAGCCAGCATATCAAAGTACAACAAGTTCTTACAGGTAAGTGGATCGCTAGATTTGGATGTGACTTCTCCAAAACAACTCAATCGAAGACTCTTTCTGAAACAGCTAGCAGTGGACTTGTGCAATAGTGAGCGAAGAATATTGTTTCGTGCTCAATACATACTGAGGAGGAGACTGAGGGATATGAGGACTGGTGAATTAAGAGCTCTAAGAATCTTCGATGGGTTCAGGAATCTTTTCCAATGA 1494 0.419 MAEASRILYSTLIPSFSPTQRTHVGQRQLSFSRRPHVHCSVSASDATRTAATETIPWGCEIDSLENASALQKWLSNSGLPPQKMAIEKVNVGERGLVALKNIRKGEKLLFVPPSLVITADSEWSCPEAGEILKRNSVPDWPLIATYLINEASLMKSSRWNDYISALPRQPYSLLYWSQAELDRYLEASQIRERAIERIDNVIGTYNDLRLRIFSKYPSLFPEEVFNIETFKWSFGILFSRLVRLSSMDGKVALVPWADMLNHSCDVETFLDYDKSSKGIVFTTDQPYQPGEQVFISYGKKSNGELLLSYGFVPKEGTNPNDSVELPLSLQKSDKCYAEKLGLLKKHGLSASQCFPVQITGWPLELMAYAYLAVSPPSMRGQFEEMAAVASNKATTKKDLRYPEIEEQALQFILDSCEASISKYNKFLQVSGSLDLDVTSPKQLNRRLFLKQLAVDLCNSERRILFRAQYILRRRLRDMRTGELRALRIFDGFRNLFQ 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01831 497 CDD SET_RBCMT 81 312 IPR044431 GO:0016279|GO:0018022
Bach12g01831 497 Pfam Rubisco LSMT substrate-binding 331 464 IPR015353 -
Bach12g01831 497 Gene3D - 317 487 IPR036464 -
Bach12g01831 497 PIRSF RMT_SET 1 494 IPR011192 GO:0009507|GO:0030785
Bach12g01831 497 ProSiteProfiles SET domain profile. 82 298 IPR001214 GO:0005515
Bach12g01831 497 Gene3D set domain protein methyltransferase, domain 1 38 311 - -
Bach12g01831 497 FunFam Rubisco methyltransferase family protein 317 480 - -
Bach12g01831 497 Pfam SET domain 94 298 IPR001214 GO:0005515
Bach12g01831 497 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 65 434 - -
Bach12g01831 497 SMART set_7 82 304 IPR001214 GO:0005515
Bach12g01831 497 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 50 311 - -
Bach12g01831 497 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 328 494 IPR036464 -
Bach12g01831 497 SUPERFAMILY SET domain 66 315 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01831 Bach-Chr12 14858872 14863686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01831 69 267 NAC Transcription Factor Family AT3G56570 23.039 4.78e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bach12g01831 SET 1.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01831 - - qsa:O6P43_014453 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01831 12 14858872 14863686 Bach12g01831 12 14858872 14863686 ECH