Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01811 ATGGCCGATTCGGATAACGACTCGGGTGGGAACGGGAACAACAACCCCAACAGCGAGCAATCGGCGAAGGAGCTGGACCGGTTCTTGCCGATCGCGAATGTGAGCAGGATAATGAAGAAGGCGTTGCCGGCGAACGCGAAGATCTCGAAGGACGCGAAGGAGACGGTGCAGGAATGCGTATCGGAGTTCATAAGCTTCATCACCGGCGAGGCCTCCGATAAGTGCCAGAGGGAGAAGAGGAAGACGGTCAACGGCGACGATTTACTCTGGGCGATGACGACCTTGGGATTCGAAGAGTACGTGGAGCCCTTGAAGATTTACCTGCAGAAGTATAGGGAGATGGAGGGCGAAAAGACCTCTATGGGGAGGCAGGGTGAGAAGGACGGTGCTTCAGGTGGTGGTTCTTCTGGCGGCGGCGCGGCGTCGATACCCGGGGGTGGAGTTGTAGTTGGAGGGTTTAATGGGGTTGGTGGAATGTATGGTGGGATGTATAATCAAGGAAACGTATACGATTCTGGTGGGTTTCATCACATGGGAATTGGTGGTGCTGGTACTGAAAAGTCTCATTCTGGTGGTAGCAGCGGTGGTGGAGCTTCTAATATGAGATCTAGGTAG 615 0.5431 MADSDNDSGGNGNNNPNSEQSAKELDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTVNGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKTSMGRQGEKDGASGGGSSGGGAASIPGGGVVVGGFNGVGGMYGGMYNQGNVYDSGGFHHMGIGGAGTEKSHSGGSSGGGASNMRSR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01811 204 SUPERFAMILY Histone-fold 26 131 IPR009072 GO:0046982
Bach12g01811 204 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 6 133 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bach12g01811 204 MobiDBLite consensus disorder prediction 187 204 - -
Bach12g01811 204 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 28 92 IPR003958 -
Bach12g01811 204 Gene3D Histone, subunit A 16 135 IPR009072 GO:0046982
Bach12g01811 204 MobiDBLite consensus disorder prediction 1 22 - -
Bach12g01811 204 MobiDBLite consensus disorder prediction 181 204 - -
Bach12g01811 204 MobiDBLite consensus disorder prediction 117 141 - -
Bach12g01811 204 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Bach12g01811 204 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Bach12g01811 204 PRINTS CCAAT-binding transcription factor subunit A signature 94 112 - -
Bach12g01811 204 FunFam Nuclear transcription factor Y subunit B-3 17 138 - -
Bach12g01811 204 ProSitePatterns NF-YB/HAP3 subunit signature. 59 75 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bach12g01811 204 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01811 Bach-Chr12 14502765 14503379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01811 1 150 CCAAT-HAP3 Transcription Factor Family AT4G14540 77.124 5.32e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach12g01811 CBFD_NFYB_HMF 2.5e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01811 K08065 - mof:131149248 234.958