Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01781 ATGCTCCCTCCACGGCAGCAGTCACGAGTTGGAGGACTACAAACATCGTTGTCTCTAGTTTCTTCTGATCCTCGCCTCTCTCCTGAGGAACCTAGATCCAACTCTGACAATAATCGTGACTCTCCCACAGAAAGTGCCAGTTCTCAAGAAACATGGCCTACTGCTGATGCATTGGCAGCAAAGAAGATGGAGAATGGGAAGGCTGAGACTGATGGTACGGAGCAATCAGTCATTCACCGTGTTTCTAGTGCAGATAAAATCACTCTTCAGGACATAGCAAGAGAAAGAGTTGATATGATTTCTGAAAAGATGGAGCATCTACCTGAAGAATTTTTAGAAGAGCTGAAGAATGGACTTCGAGTTATCCTTGAGGGAGGCAATGGTTCACAGCATAGAGAGGAATTTTTTATTTTGCAGAAACTTGTTCAAAGTAGAACTGATTTAACAACCAAAACATTGATGAGAGCACATCGTGTGCAGCTTGAAATCCTTGTTGCAATAAACACTGGAATTCAGGGATTTTTGCATCCAAGTATTAGTCTGTCACAAAATTCCCTGATTGAGATCTTCATGTACAAGAGATGCAGAAACATAGCATGCCAAAGCCAGCTTCCTGCTGATGATTGTACCTGTGAGATATGCACCAACAGAAATGGTTTCTGCAATCTTTGCATGTGTGTAATCTGCAACAAGTTTGACTTTGAAGTTAATACATGTCGCTGGATTGGATGTGATTTATGTTCTCATTGGACTCACACAGATTGTGCCATTCGGGATCAACTTATTTGCATGGACCCTTCTATGAAGAGTGGAGCAGGACCCAGTGAGATGGTTTTCAGGTGTCAAGCATGCAATAGAACTTCAGAACTGTTGGGTTGGGTTAAAGATGTTTTCCAACATTGTGTGCCATCCTGGAATGGGGAAGCTTTAATGAGGGAGCTTGATTTTGTTAGTAGGATCTTTCATGGTAGTAAAGACCCCCGAGGAACGAAATTATTTTGGAAGTGTAAGGAACTCAAAGAAAAGATGAAAAGTGGAATAGCAGAATCAAAGGCAGTTTGCAGGGCAATATTATTATTTTTCCAAGAGCTGGAGCTGGACTCGCCAAAGGGCCTGGAAAATGGAGAAAGTGGAAGGCTGGTTGCTCCACAGGAAGCATGCAATAGAATCACTGAAGTGGTGCGAGAGGCCATAAGAAAGATGGAAATGGTAGCTGATGAAAAGTTGAGAATGTTTAAGAAGGCCCGCTTGGCTCTTGACAGTTGTGATCGTGAGTTGGCAGACAAGGCCAGGGAAGCAGCAGAACTTAAGATGGAGAGGCAAAAAAGGAAATTGCAGGTTGAAGAACTGGAGAGAATTGTGAGGCTTAAAACTGCAGAGGCTGAAATGTTCCAATCTAAGGCTAATGAAGCAAAACGAGAGGCTGAGAGGCTCCAGAGGATTGCTCTTGCTAAGCAAGATAAATCAGAGGAAGAATATACAAGCAACTACTTAAAACAACGATTAAGTGAGGCTGAGGCTGAGAAGAAATATCTGTATGAAAAGATCAAATTGCAGGAGAGTACCCGCACATCACAGAGCAGTAGCGGTGGTGACCCTTCTCAGATGCTTATCTTTTCCAAAATCCATGATCTGCTTCAACCAAATGAACGCCACTCTCTCCGGACTAATCCATGAGTACTAGTCCCATTCTGTTTACAATATGATTACTGTTGTCATTCTGTTTTAAACAAGTATAAA 1740 0.4247 MLPPRQQSRVGGLQTSLSLVSSDPRLSPEEPRSNSDNNRDSPTESASSQETWPTADALAAKKMENGKAETDGTEQSVIHRVSSADKITLQDIARERVDMISEKMEHLPEEFLEELKNGLRVILEGGNGSQHREEFFILQKLVQSRTDLTTKTLMRAHRVQLEILVAINTGIQGFLHPSISLSQNSLIEIFMYKRCRNIACQSQLPADDCTCEICTNRNGFCNLCMCVICNKFDFEVNTCRWIGCDLCSHWTHTDCAIRDQLICMDPSMKSGAGPSEMVFRCQACNRTSELLGWVKDVFQHCVPSWNGEALMRELDFVSRIFHGSKDPRGTKLFWKCKELKEKMKSGIAESKAVCRAILLFFQELELDSPKGLENGESGRLVAPQEACNRITEVVREAIRKMEMVADEKLRMFKKARLALDSCDRELADKAREAAELKMERQKRKLQVEELERIVRLKTAEAEMFQSKANEAKREAERLQRIALAKQDKSEEEYTSNYLKQRLSEAEAEKKYLYEKIKLQESTRTSQSSSGGDPSQMLIFSKIHDLLQPNERHSLRTNP 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01781 558 MobiDBLite consensus disorder prediction 1 52 - -
Bach12g01781 558 Pfam PHD - plant homeodomain finger protein 195 318 IPR032881 -
Bach12g01781 558 Pfam Coiled-coil region of Oberon 413 546 IPR032535 -
Bach12g01781 558 Coils Coil 461 488 - -
Bach12g01781 558 MobiDBLite consensus disorder prediction 38 52 - -
Bach12g01781 558 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 35 548 IPR004082 -
Bach12g01781 558 SMART PHD_3 225 285 IPR001965 -
Bach12g01781 558 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 487 509 IPR004082 -
Bach12g01781 558 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 103 125 IPR004082 -
Bach12g01781 558 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 160 175 IPR004082 -
Bach12g01781 558 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 448 468 IPR004082 -
Bach12g01781 558 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 145 160 IPR004082 -
Bach12g01781 558 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 186 207 IPR004082 -
Bach12g01781 558 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 232 252 IPR004082 -
Bach12g01781 558 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 305 324 IPR004082 -
Bach12g01781 558 MobiDBLite consensus disorder prediction 518 540 - -
Bach12g01781 558 MobiDBLite consensus disorder prediction 1 23 - -
Bach12g01781 558 MobiDBLite consensus disorder prediction 518 535 - -
Bach12g01781 558 Coils Coil 419 453 - -
Bach12g01781 558 PIRSF UCP025218 1 556 - -
Bach12g01781 558 CDD PHD_OBE1_like 225 284 IPR047578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01781 Bach-Chr12 14130882 14132970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01781 195 297 PHD Gene Family AT5G57380 31.132 5.13e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01781 - - gmx:100795450 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01781 12 14130882 14132970 Bach12g01781 12 14130882 14132970 ECH