Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01777 ATGGTTTCTTCAGATGAAAGTGCAGATCACAATGTTTCTTCTGATAATTTGCAGCAGAGACTGAGTCCTCATAGTGGAAGTACAGTTTCACAAGAGATTCATGATACTATTAATTCATCCAAAACAGAGGGAACCAAAGACATTCCTCCTGTTACAGCTGAGAAAGAAGTACAAAATTCTGATGTTACCACTTGTATAACGCAATCTGGTCAAGAAAGAAGTACGCTCTCTTTAGCACTTGTGAAACCTTTGCAGATCCCTAATACTGTTTCACATGCATTACAATCTGGTCAGGACAGTCCCTCTTTAGCACGTGAAAGGGTCTCAAAGGATGGATATAACTGGCGAAAATATGGCCAGAAACATGTTAAGGGAAATGAATTTATAAGAAGCTACTACAGGTGTACACATCCAAGCTGCCTGGCAAAGAAGCAATTAGAACAGTCACATAGTGGGCAAGTTACAGATACCGTTTGTATTGGTCAACATAATCATCCTAGACCTCAACTAACTACCCCACCGTCAGTTGATTTTGTTGTACCTGCTGTTAAAGAAAGACTAAATAAGCCCTCTTTAGCCGATGAAGATGATGAAGCATCAACTGAGCAGGGATGTGTGCCTCAACAGATGAAGCCTTTAGATTCCCTTCCAATTTCAACAGTTTCATCATGTGATGAGGTCAAAGGCGCGCAGTTACAATTAGCTTTGGTAAAGGATGAGGTTCATAACAACAAGGATCCTGAGTCAAAACGGGTTAAGAAAGACAATTGTAGTGCTGATGTTACTGGAGTTGAGAAGTCAACTAGTGAATCACGCGTTGTTGTGCAAACCTCAAGTGAGGTTGATTTTGTAAATGATGGGTACCGCTGGCGCAAGTATGGGCAGAAACTAGTAAAAGGGAATCCAAATCCAAGGAGTTATTATCGATGCTCAAATCCTGGATGCCCAGCGAAGAAGCATGTGGAAAGGGCTTCTCACGATCCAAAAGTTGTAATAACTACCTACGAGGGAAAACATGATCATGAAATGCCCCCTGGAAGAGCTGTTACTCAAAATGCAGCAGCAGCTACTCAAGTGGCAGCCAATAATGGTGGATCAGGAACCAAGTCTGGTGGCACAAACGGGTTAAATGATCAACTAAATGGTAAGATGAGTACTAAATCAAAGGATGAGGTTACGAACCATCCCAGTGGGGATCATAGAAGTAAGTCGAGTGAGCAAGAACAAGCACATGACAACTCTAGTACAAGAAAAGATTCTGCCAGCTTTGATGTTGTGGGCCATTCAAGTGCTGGGGTTCCCTGTAGATCAGTTGAGCAGCTGAAAGGTAAGATAAGAACTAAATCAGAAGAAAGTGAGGAAGATCGCCCTTGTGTGGTTTCTGTTCATGATAGTCATGGTAAAGAGGGTAAATTAAATAAGCGACCTAAGCCTGATGCAGAATCTGTCCAAAGCTAAATTTGCAATGCTGTTTGAAGTTGCAGCAAATTAATAGAGACCATTAAATAGTTGACAATACCATAGGTTATATAGGAATAATTGTTATGAGGTTATGATTCATGTTACTACCCTAACCTTCTCAACTCTCTCCCTTTCTCTGATTCCCTATCTTTGGGTGAAGGTTCACTAGATATGCTCATATGGAAGCAACGAATAATCTACATATAATATCATCACTTGTATACTATTATTCACATGTGATAGATTGTTGATGTATATTTTCCCATACATGTATCCAAAATTTCAATTTTTTGTAATATACTGTTGACTGTATCAAAAGTAA 1783 0.3993 MVSSDESADHNVSSDNLQQRLSPHSGSTVSQEIHDTINSSKTEGTKDIPPVTAEKEVQNSDVTTCITQSGQERSTLSLALVKPLQIPNTVSHALQSGQDSPSLARERVSKDGYNWRKYGQKHVKGNEFIRSYYRCTHPSCLAKKQLEQSHSGQVTDTVCIGQHNHPRPQLTTPPSVDFVVPAVKERLNKPSLADEDDEASTEQGCVPQQMKPLDSLPISTVSSCDEVKGAQLQLALVKDEVHNNKDPESKRVKKDNCSADVTGVEKSTSESRVVVQTSSEVDFVNDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPAKKHVERASHDPKVVITTYEGKHDHEMPPGRAVTQNAAAATQVAANNGGSGTKSGGTNGLNDQLNGKMSTKSKDEVTNHPSGDHRSKSSEQEQAHDNSSTRKDSASFDVVGHSSAGVPCRSVEQLKGKIRTKSEESEEDRPCVVSVHDSHGKEGKLNKRPKPDAESVQS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01777 485 MobiDBLite consensus disorder prediction 441 478 - -
Bach12g01777 485 Pfam WRKY DNA -binding domain 110 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g01777 485 Pfam WRKY DNA -binding domain 285 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g01777 485 Gene3D WRKY domain 271 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g01777 485 MobiDBLite consensus disorder prediction 1 59 - -
Bach12g01777 485 MobiDBLite consensus disorder prediction 384 418 - -
Bach12g01777 485 FunFam WRKY transcription factor 98 169 - -
Bach12g01777 485 Gene3D WRKY domain 100 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g01777 485 ProSiteProfiles WRKY domain profile. 279 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g01777 485 MobiDBLite consensus disorder prediction 189 212 - -
Bach12g01777 485 MobiDBLite consensus disorder prediction 243 260 - -
Bach12g01777 485 MobiDBLite consensus disorder prediction 361 383 - -
Bach12g01777 485 SUPERFAMILY WRKY DNA-binding domain 276 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g01777 485 MobiDBLite consensus disorder prediction 1 46 - -
Bach12g01777 485 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 47 395 IPR044810 GO:0003700
Bach12g01777 485 MobiDBLite consensus disorder prediction 243 266 - -
Bach12g01777 485 SUPERFAMILY WRKY DNA-binding domain 106 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g01777 485 FunFam WRKY transcription factor 57 270 344 - -
Bach12g01777 485 ProSiteProfiles WRKY domain profile. 104 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g01777 485 MobiDBLite consensus disorder prediction 361 485 - -
Bach12g01777 485 SMART WRKY_cls 109 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g01777 485 SMART WRKY_cls 284 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01777 Bach-Chr12 14082390 14089694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01777 93 364 WRKY Transcription Factor Family AT2G04880 49.458 2.56e-85 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach12g01777 WRKY 2.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01777 K18834 - gmx:100781219 558.91