Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01750 ATGAGGAAAAGGGAGAGAGAGAATCCTTGTGGGGTGTGTGGCCACTATCACAAGTATGAAGAAGGGGAAGTCTGTTCGATTTGTGGCCACCGGATTCCAGTCCCATCGGATAAAAATTCAATTCAAGTTAGTGCCTTTCCGTCAGTGATTTTGCCGGAATTTCTTTACTTGGGCAGCTACGATAACGCATCACGCTCGGAGCTTCTCAAAACCCTGGGAATCTCTTGCATCCTCAATACGGTTCCTTCTTGTCAAAATCTCTACAAAAACTCGTTTACATATCACTGCTTACCAGATGACAAAGCTTTGCCATTTGATGATGCAATTGAGTTTCTAGAACAATGTGAGAGGGACAAGGCTCGTGTTCTGGTTCATTGCATGTCAGGAAAGAATAGGTCTCCAGCTATTGTGATTGCATATCTGATGAAGTCCAAGGGATGGAGATTGTCAGAGAGTTACCACTGGGTGAAAGAGCGAAGACCTTCTGTTGAATTATCTCAAGGTGTCTATCAGCAACTGCAGGAGTACCAGCACAAGCTCTATGGATCGATTGACACTGGCAGCTCTCTGCTGCCTGCGCTCCCACCTGCTGTGCCTCCTTCAATAAGCTTTGGCTTCCCAAAGACTAATGACTCAGCTGCTCCTCTTCCTGCCTTCGGCAATGCTGGAGCTACATCGATTTTTGCGCGATCTACCATAGACATCCCTCCGACTGAGTTTACTTTTGGAGCTGGTCAGGTTCACAATCCGAGTAATCCAAACGGCAGTGATATACAAATGGATGGTTCTTGATCGTTCACTACCACCATTACCATCTTTGATAAGCAAGCTGACTTTGATGAGCTTGTTATCTGGAATCTGTAAAATAAGGGTAAAGGTTCA 882 0.4535 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPVPSDKNSIQVSAFPSVILPEFLYLGSYDNASRSELLKTLGISCILNTVPSCQNLYKNSFTYHCLPDDKALPFDDAIEFLEQCERDKARVLVHCMSGKNRSPAIVIAYLMKSKGWRLSESYHWVKERRPSVELSQGVYQQLQEYQHKLYGSIDTGSSLLPALPPAVPPSISFGFPKTNDSAAPLPAFGNAGATSIFARSTIDIPPTEFTFGAGQVHNPSNPNGSDIQMDGS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01750 263 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
Bach12g01750 263 FunFam Protein-tyrosine-phosphatase IBR5 36 186 - -
Bach12g01750 263 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 181 IPR029021 -
Bach12g01750 263 MobiDBLite consensus disorder prediction 243 263 - -
Bach12g01750 263 CDD DSP_plant_IBR5-like 47 176 - -
Bach12g01750 263 Pfam Dual specificity phosphatase, catalytic domain 55 178 IPR000340 GO:0008138|GO:0016311
Bach12g01750 263 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Bach12g01750 263 MobiDBLite consensus disorder prediction 244 263 - -
Bach12g01750 263 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Bach12g01750 263 Gene3D Protein tyrosine phosphatase superfamily 40 186 IPR029021 -
Bach12g01750 263 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 263 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Bach12g01750 263 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01750 Bach-Chr12 13502125 13507415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01750 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 75.740 3.46e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01750 K04459 - gmx:100806021 440.654