Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01740 ATGCCCTTTACCGTATTCAAGGAGGATCAATTCTCGTTTCCCTGTGATCTCTTCTGCGAATTCGGCGACCACCTCATGCAGGACGCGTTCTCCGCCATGGACATTCCCTCTGAGCTGTCGGACATGGTGTCGTCTCGTGTCGTCTCTTTCGCGAGAAACATGGTTGCAGACAACTGCAAAGGGTGTCCTGTTTTGAACATGGCTGTGAGGATTCATGTGACTAATTATACACCCGGTGCTCCCAGTGATGGCGATGATAGTCGCCGGCAAGTGTTGAGGGAAAACTTTGTTAATTCATTGGGGAAAGTTAGAGTTGACGATGATGGGTCTTGTTGCAGTATTTGTTTGGACAAGTTTTGCGTTCGATCGGAGGTTGTCGGAACGCCGTGCTCGCATGTTTTCCACCGAGATTGTATTCTGCGGTGGTTCAAGGATCAATCGTCTTGCCCATTGTGTCGCTACCATGCCCCTTGTTGA 477 0.4969 MPFTVFKEDQFSFPCDLFCEFGDHLMQDAFSAMDIPSELSDMVSSRVVSFARNMVADNCKGCPVLNMAVRIHVTNYTPGAPSDGDDSRRQVLRENFVNSLGKVRVDDDGSCCSICLDKFCVRSEVVGTPCSHVFHRDCILRWFKDQSSCPLCRYHAPC 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01740 158 SMART ring_2 112 152 IPR001841 -
Bach12g01740 158 Pfam Ring finger domain 112 153 IPR001841 -
Bach12g01740 158 ProSiteProfiles Zinc finger RING-type profile. 112 153 IPR001841 -
Bach12g01740 158 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 94 157 - -
Bach12g01740 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 157 IPR013083 -
Bach12g01740 158 SUPERFAMILY RING/U-box 104 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01740 Bach-Chr12 13365738 13366214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01740 106 154 C3H Transcription Factor Family AT3G58720 42.857 1.50e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01740 - - cave:132168155 92.0485