Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01738 ATGCCAGAAAACCGGCAGGTTCAGAAGAATGCTGGTTCTGATCAATCCGGGGACAACATTGAAGAAGCCATTCGGCGACTGAAAATCAATGATAATCGGGACCGTGAAGCTGCTGCTCTATCAACCCTCTTCCCGGATCGACCTGGAGAACCTGATTGCTTATATTACCTGAGGACGGGATCTTGCGGTTATGGGAGTAATTGCCGTTATAATCATCCTGCACACGTTTCTCTTGGTGCTCAATATGGTGATGATCTCCCCGAAAGGATTGGACAACCAGATTGCGGGTATTTTCTTAAGACGGGAACGTGCAAATATGGATCAACATGTAAATATCATCATCCAAGTGACAGACGAGGTGCTAGTCCTGTATCCTTTAATGCTCTAGGGCTTCCCATGCGACAGGAAGAAAAATCATGTCCATATTACATGCGTACTGGGGCTTGTAAGTTTGGAGTTGCATGCAAGTTTAATCATCCACAGCCTGCCTCCATGGAGGCTGCTCCAGTGACTGGATCTCTTGCCTCAGCAATTATTCCTTCATCTGGCTTGCCATACATGGGTGGGCTTCCTGCATGGTCATTACCAAGAATGCCATATTTACAGGGACTTCAATCTTATGTGCCTACTATTCTGCCTACTTCACAAGGATATGCACAGGGCTGGAATAGCTACATGGGAAGTGTGAACCCTGCAGCGTCCGCCAATTTTCTTGGGTCTAATCTTGTTTACAACTCGATGAATCTGGGAGATCCGATTTCTGGAGGGCAGATTAATTTATTTTCAACAATTCCAGCTCTCCCTGAGAGACCTGACCAACCAGAATGCCGATACTTTATGAGCACTGGGACCTGCAAATTTGGACCTGATTGCAAGTTCCACCACCCAAAAGAAAGAGTTGCCCAAGTGATTAATCCTCTTGGCCTTCCCATAAGACCTGGGCAAGCTATATGTTCTTCCTACAAAGTCTATGGCATATGCAAGTTCGGTCCAACATGCAAATTTGATCATCCATATGTGGCAATCCATCAAAACTATAGCTTGCAAGTACCCACTATGCCTCTGCTTGGTGAATCTATCATAAGTAATCCAAGAAGCTTGTCAAGGCCATCTGAGACATCTCAATCGAAATCACCAAAATTACCTGACTGGGTTCCCAAATCTGATTCCTCAAGTGCCAAGATTCAAAACACTGATACAAAAGCTACAGAAGATACATCAAAACAAGCCGATGTTACACCAAATCCGGTTCCAGCCTCTTCGGAGTCTGTACAGGATTAA 1281 0.4504 MPENRQVQKNAGSDQSGDNIEEAIRRLKINDNRDREAAALSTLFPDRPGEPDCLYYLRTGSCGYGSNCRYNHPAHVSLGAQYGDDLPERIGQPDCGYFLKTGTCKYGSTCKYHHPSDRRGASPVSFNALGLPMRQEEKSCPYYMRTGACKFGVACKFNHPQPASMEAAPVTGSLASAIIPSSGLPYMGGLPAWSLPRMPYLQGLQSYVPTILPTSQGYAQGWNSYMGSVNPAASANFLGSNLVYNSMNLGDPISGGQINLFSTIPALPERPDQPECRYFMSTGTCKFGPDCKFHHPKERVAQVINPLGLPIRPGQAICSSYKVYGICKFGPTCKFDHPYVAIHQNYSLQVPTMPLLGESIISNPRSLSRPSETSQSKSPKLPDWVPKSDSSSAKIQNTDTKATEDTSKQADVTPNPVPASSESVQD 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01738 426 MobiDBLite consensus disorder prediction 361 381 - -
Bach12g01738 426 SUPERFAMILY CCCH zinc finger 52 74 IPR036855 GO:0046872
Bach12g01738 426 MobiDBLite consensus disorder prediction 389 426 - -
Bach12g01738 426 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 138 161 IPR000571 GO:0046872
Bach12g01738 426 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 314 338 IPR000571 GO:0046872
Bach12g01738 426 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 272 297 IPR000571 GO:0046872
Bach12g01738 426 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 49 73 IPR000571 GO:0046872
Bach12g01738 426 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 92 115 IPR000571 GO:0046872
Bach12g01738 426 MobiDBLite consensus disorder prediction 1 20 - -
Bach12g01738 426 Gene3D - 11 83 - -
Bach12g01738 426 MobiDBLite consensus disorder prediction 1 17 - -
Bach12g01738 426 ProSiteProfiles Zinc finger C3H1-type profile. 47 75 IPR000571 GO:0046872
Bach12g01738 426 SUPERFAMILY CCCH zinc finger 310 338 IPR036855 GO:0046872
Bach12g01738 426 Gene3D - 88 173 - -
Bach12g01738 426 Gene3D - 268 347 - -
Bach12g01738 426 ProSiteProfiles Zinc finger C3H1-type profile. 312 340 IPR000571 GO:0046872
Bach12g01738 426 SMART c3hfinal6 312 339 IPR000571 GO:0046872
Bach12g01738 426 SMART c3hfinal6 89 116 IPR000571 GO:0046872
Bach12g01738 426 SMART c3hfinal6 270 297 IPR000571 GO:0046872
Bach12g01738 426 SMART c3hfinal6 47 74 IPR000571 GO:0046872
Bach12g01738 426 SMART c3hfinal6 136 161 IPR000571 GO:0046872
Bach12g01738 426 ProSiteProfiles Zinc finger C3H1-type profile. 134 162 IPR000571 GO:0046872
Bach12g01738 426 PANTHER PROTEIN PHOSPHATASE RELATED 19 376 - -
Bach12g01738 426 ProSiteProfiles Zinc finger C3H1-type profile. 270 298 IPR000571 GO:0046872
Bach12g01738 426 MobiDBLite consensus disorder prediction 361 426 - -
Bach12g01738 426 SUPERFAMILY CCCH zinc finger 273 299 IPR036855 GO:0046872
Bach12g01738 426 ProSiteProfiles Zinc finger C3H1-type profile. 89 117 IPR000571 GO:0046872
Bach12g01738 426 SUPERFAMILY CCCH zinc finger 94 117 IPR036855 GO:0046872
Bach12g01738 426 SUPERFAMILY CCCH zinc finger 133 162 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01738 Bach-Chr12 13345336 13349410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01738 1 410 C3H Transcription Factor Family AT1G04990 45.412 8.37e-113 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach12g01738 zf-CCCH 1.7e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01738 - - gmx:100792928 582.793