Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01716 ATGGAAATTATCAACAAAATCTTCTGTGCTGCCACCGTTGCTGTTTTTCTCTTCAATTTCCATGTTCCATTCTCACAAGCTCAGCAAGAATACACGAACAACAAGCAATCAGATTGTGGAAATCCTACCAATGCCACACTCGGCAATGCTTGTAACAGCGTCAATTCCTGTCTCTCCTACCTCACTTTCCGATCAATTTCCCCTTATACCACCCCCGCCACCATAGCCTCTCTCTTGAACTCCACTGCCGCCGACATATCCGCTGCCAATGACTTATCCGGTGATGCCAATGAAGCCATCCCGGCGACCACCAATCTAATCATTCCTGTTAATTGCTCCTGCTCTGGATCAGGGCTTTACTATCAATATAACTCCTCTTATCTTTTGAAGACAGATGATACATATCTGTTAGTGGCTAATAACACTTTCCAGGGACTCACCACTTGCCAAGCTCTCATGGCTCAGAACACTTATGGCGAGAGAAATCTTTCACCTGGGCTCAACGTGAGCGTGCCTCTCAGGTGTGCTTGTCCCACTTCGAACCAGACCCAGGCTGGGTTCAAGTATTTGATTACCTATATGATTTCTCAAGGGGAATCTGTTTATTCAATTTCTCAGCAATTCGGTGTCGATGATCAAAGTGTTTTGGATGCAAACATGCTATCTGGAAACAACATCTTCTACTTCACCCCACTCATGGTTCCTCTGAAACAAGAGCCTAACAGAACCCAACTAGTCATTGCGACGCCACCGCCGCCGCCTCCACCTCCCCCGTCATCGGTCCCTAGTGGGGATGGAGATTCAGACTCTTCTACGAAATGGATCATCGTTGGAATCGCGGTTGGAGCTGGTTTGGCTGTTATATTGGGAATTTTCCTCTTTTTCTATTGCCGCCGCCGCCGCCGCAGCCAACCTCAGTTGCCGGAGGCAAAGAATCTCTCTGTTTCTGAAATTGACACGGGTAAGAATCTCTTCGATTCCACCACGAATGAGTCGTGGTCGGTTTCATTGGATGGTCTCCGCGATGCGGTTGCTTCCTTAACAGTGTACAAATTCGAGGACCTGCGGAAAGCTACAAACTTTTTCAGCGATAATAACAGAATTAAGGGATCTGTTTACAGAGCATCATTCAAGGGAGACGATGCTGCTATTAAGGAGCTTAAAGGGGATGTCTCAGCTGAAATCAACATTCTGGTACAAATCAACCACACCAACATCACAAGGCTTTCTGGGTTCTGCGTCTACAAAGGAAACACCTACCTTGTTTACGAATATGCCCAAAATGGTTCACTAGATGATTGGCTTCATTCTGATAAGAATCAAAATCCTATCACTCTGAATTGGAAGCAGAGGGTTAAGATTGCATATGATATAGCTGATGCTTTGAATTACCTGCACAATTACACCAACCCAGTTCATATCCACAAGAACTTGAACAGCGGGAATGTACTTTTGGATGCCAATCTCAGAGCCAAAGTTTCAAACTTTGGGTTAGCAAGAGCAGTGAACAATGAAGAAGAAGAGGGATTTCAAATGACAAGGCATGTGATTGGAACTCGAGGCTATATGGCACCTGAGTATACTGAACATGGAGTTATTACCCCCAAAATGGATGTTTTTGCTTTTGGGGTTTTGACTTTGGAGCTTCTTTCTGGAAGAGAAGCCATCGTTGGGGAGGAGATGCTAGCTGCCTCCATCAGTGAGGTGCTCGAAGGAGACGATGAGAGAGAGAAACTTCGGGTTTTCATGGATCCGATTTTGGGGTCGGAATACCCATTGGATTTGGCCTACTCTATGGCCCAGCTTGCAAAACGCTGCGTTTCACCTAACTACAATTCTCGTCCGACAATGTCTGAGGTTTTGATGACTCTGTCCAAGATTCAATCCAGTACGTCAGATTGGGATCCATCAGAGGACAGCTAG 1923 0.4576 MEIINKIFCAATVAVFLFNFHVPFSQAQQEYTNNKQSDCGNPTNATLGNACNSVNSCLSYLTFRSISPYTTPATIASLLNSTAADISAANDLSGDANEAIPATTNLIIPVNCSCSGSGLYYQYNSSYLLKTDDTYLLVANNTFQGLTTCQALMAQNTYGERNLSPGLNVSVPLRCACPTSNQTQAGFKYLITYMISQGESVYSISQQFGVDDQSVLDANMLSGNNIFYFTPLMVPLKQEPNRTQLVIATPPPPPPPPPSSVPSGDGDSDSSTKWIIVGIAVGAGLAVILGIFLFFYCRRRRRSQPQLPEAKNLSVSEIDTGKNLFDSTTNESWSVSLDGLRDAVASLTVYKFEDLRKATNFFSDNNRIKGSVYRASFKGDDAAIKELKGDVSAEINILVQINHTNITRLSGFCVYKGNTYLVYEYAQNGSLDDWLHSDKNQNPITLNWKQRVKIAYDIADALNYLHNYTNPVHIHKNLNSGNVLLDANLRAKVSNFGLARAVNNEEEEGFQMTRHVIGTRGYMAPEYTEHGVITPKMDVFAFGVLTLELLSGREAIVGEEMLAASISEVLEGDDEREKLRVFMDPILGSEYPLDLAYSMAQLAKRCVSPNYNSRPTMSEVLMTLSKIQSSTSDWDPSEDS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01716 640 MobiDBLite consensus disorder prediction 245 268 - -
Bach12g01716 640 MobiDBLite consensus disorder prediction 246 262 - -
Bach12g01716 640 Gene3D Phosphorylase Kinase; domain 1 327 425 - -
Bach12g01716 640 ProSiteProfiles Protein kinase domain profile. 341 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01716 640 FunFam PTI1-like tyrosine-protein kinase 3 426 638 - -
Bach12g01716 640 SUPERFAMILY LysM domain 191 235 IPR036779 -
Bach12g01716 640 Pfam LysM domain 193 232 IPR018392 -
Bach12g01716 640 CDD TM_EGFR-like 275 302 - -
Bach12g01716 640 Gene3D LysM domain 177 245 IPR036779 -
Bach12g01716 640 ProSiteProfiles LysM domain profile. 191 234 IPR018392 -
Bach12g01716 640 SMART LysM_2 192 235 IPR018392 -
Bach12g01716 640 SUPERFAMILY Protein kinase-like (PK-like) 346 629 IPR011009 -
Bach12g01716 640 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 16 637 - -
Bach12g01716 640 Gene3D Transferase(Phosphotransferase) domain 1 426 638 - -
Bach12g01716 640 Pfam Protein tyrosine and serine/threonine kinase 386 623 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01716 Bach-Chr12 13109740 13111662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01716 10 639 Receptor kinase-like Gene Family AT2G33580 51.982 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bach12g01716 PK_Tyr_Ser-Thr 1.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01716 - - gmx:100818534 727.243