Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01709 ATGATAGGGTTTGGAGACAACAGTTGCAGTGGGCTTTCATCCATGGACATGTTGATGCCACTAACAAATAGGCCGTTTCATCCTAACAACAGCAGTTCTGCTGCTCAGACTAGCAGTGGCCAAAGGGTATCTTTTGCTTTGAACATGGATCAAGATCATGACTATGGCCAGGAAACAAACGGTTGCAGTGTGAGGGCTAAAATCATGGCACACCCTCTCTTTCCTAAACTCTTGTCTGCTTACCTCAACTGCCAGAAGGTTGGAGCACCTCCTGAAGTGGTGGCCAGGTTAGAAGAGGCATGTGCTAAAGCTCAATCCTCTCACATGGGGAGAACAGGAACTGGTGCTATCGGTGAAGACCCAGCATTGGATCAGTTCATGGAGGCATACTGTGAGATGCTTATCAAGTATGAGCTAGAGCTCTCAAAACCCTTCAAAGAAGCCATGGTTTTCCTTTCAAGGATGGAGTGTCAGCTTAAAACTCTAGCAGTTTCAACAGATTCTTCAGGTCAAAGTGGATCTTCTTCTCAAGATGAGCTTGATGTCCATCAAAATAACATAGATCCTCAAGCTGACGACAGAGAACTGAAAGTTCAACTTCTGCGGAAGTACAGTGGATACCTCGGTAGCCTCAAGCAGGAATTTCTGAAGAAGAAAAAGAATGGGAAGTTACCGAAGGAAGCTCGCCAGCAGTTGCTGGAGTGGTGGAGCAGACATTATAAATGGCCTTATCCAACGGAATCCCAGAAGCTGGCACTGGCTGAAACCACAGGTTTAGATCTGAAGCAGATCAACAACTGGTTCATCAACCAGAGAAAACGCCACTGGAAGCCGTCTGAGGACATGCAATTTGTTGTGATGGAGCCAACTAACCCCCACCAATATTTGGAAAGTGTTATGTGCAGGCCCTTTTCGATGGATGGCATGCCTATGCTCCTTTGA 942 0.4639 MIGFGDNSCSGLSSMDMLMPLTNRPFHPNNSSSAAQTSSGQRVSFALNMDQDHDYGQETNGCSVRAKIMAHPLFPKLLSAYLNCQKVGAPPEVVARLEEACAKAQSSHMGRTGTGAIGEDPALDQFMEAYCEMLIKYELELSKPFKEAMVFLSRMECQLKTLAVSTDSSGQSGSSSQDELDVHQNNIDPQADDRELKVQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLEWWSRHYKWPYPTESQKLALAETTGLDLKQINNWFINQRKRHWKPSEDMQFVVMEPTNPHQYLESVMCRPFSMDGMPMLL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01709 313 Gene3D - 213 284 - -
Bach12g01709 313 ProSiteProfiles ELK domain profile. 195 215 IPR005539 GO:0003677
Bach12g01709 313 ProSiteProfiles 'Homeobox' domain profile. 215 278 IPR001356 GO:0003677
Bach12g01709 313 SUPERFAMILY Homeodomain-like 217 288 IPR009057 -
Bach12g01709 313 CDD homeodomain 227 279 IPR001356 GO:0003677
Bach12g01709 313 SMART ELK_2 195 216 IPR005539 GO:0003677
Bach12g01709 313 Pfam ELK domain 195 216 IPR005539 GO:0003677
Bach12g01709 313 ProSitePatterns 'Homeobox' domain signature. 253 276 IPR017970 GO:0000981|GO:0006355
Bach12g01709 313 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 62 284 - -
Bach12g01709 313 SMART KNOX1_2 62 106 IPR005540 GO:0003677|GO:0005634
Bach12g01709 313 Pfam KNOX1 domain 64 103 IPR005540 GO:0003677|GO:0005634
Bach12g01709 313 Pfam Homeobox KN domain 235 274 IPR008422 GO:0003677|GO:0006355
Bach12g01709 313 SMART KNOX2_2 113 164 IPR005541 GO:0003677|GO:0005634
Bach12g01709 313 MobiDBLite consensus disorder prediction 24 41 - -
Bach12g01709 313 SMART HOX_1 217 282 IPR001356 GO:0003677
Bach12g01709 313 Pfam KNOX2 domain 117 162 IPR005541 GO:0003677|GO:0005634
Bach12g01709 313 MobiDBLite consensus disorder prediction 20 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01709 Bach-Chr12 12996545 13000576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01709 64 307 Homeobox Transcription Factor Family AT1G62360 67.954 1.54e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Bach12g01709 KNOX2 9.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01709 - - gmx:100791704 434.491