Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01706 CCTTGTTTTCTGATTAAACGGAGGGACTTCAGCGGGATCTGGTTTGTTCTCTGCTATGAAGAGGTTCAACAGCTCAGATTCTATGGCTGCTTTGATCTCCATGTGTTCTTCAAAAGAGGTGAAGCAGAGGAAGGAGAACCTTGGTTACAGTGAAGAGTTTCAGGCAATGTTAGAGAGATTTGAGCAAGAAGATAGCTGCGAAGAAACTTCTCTAATCTTGGAGAAGAAAAGGAGACTGGGTTTTGATCAGGTCAAGGCCCTGGAGAGGAACTTTGAGCTTGATAACAAGCTTGACCCAGAGAAGAAAGTGAAGCTAGCTATAGAACTAGGCCTGCAACCAAGGCAGGTTGCAATTTGGTTCCAAAATCGCAGAGCCCGGTGGAAGACTAAGCAATTGGAAAGAGACTACAGCATCCTCAAGTCAAATTTTGATGCTTTGAAGATTGATTACAATAATCTTGAACAAGAAAATGAAGCTCTAGCCATAAAGTTAAGTGAGTTGAAGGGAAAATTCAACAAGAATAGAGCAGAGAGAAATGGGTCTGTGAAAGAAGAATCTCCCATTTCAGAAGTGGAAAGCCAGAAATTTTCTGAGCAGAATTTTGCTGGAAGTGCAACATCTGATAGCAATTCAAATGGGATTGTGAAGGAAGAAAGCAATGTGGATTCTCCTCAGTGTTTCAATGAGTCTTTTCCCAATTCAGGTTCAATCATAAACTGGCTTCAGTACTCTGATTCAAGAGGGTCACCAGAGAGAGCTTTCCAGACTCAATTCATGAGAATGGACGAGCAGAGTTTGTTTAGTGTTAATGAGTTCTGCGATTTCTTTTCTGTTGATCAATCTCCTACCCTCTAAATTGTGCTTAATTAAGC 873 0.4124 MKRFNSSDSMAALISMCSSKEVKQRKENLGYSEEFQAMLERFEQEDSCEETSLILEKKRRLGFDQVKALERNFELDNKLDPEKKVKLAIELGLQPRQVAIWFQNRRARWKTKQLERDYSILKSNFDALKIDYNNLEQENEALAIKLSELKGKFNKNRAERNGSVKEESPISEVESQKFSEQNFAGSATSDSNSNGIVKEESNVDSPQCFNESFPNSGSIINWLQYSDSRGSPERAFQTQFMRMDEQSLFSVNEFCDFFSVDQSPTL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01706 266 SUPERFAMILY Homeodomain-like 58 123 IPR009057 -
Bach12g01706 266 Pfam Homeobox associated leucine zipper 112 152 IPR003106 GO:0006355|GO:0043565
Bach12g01706 266 ProSiteProfiles 'Homeobox' domain profile. 56 112 IPR001356 GO:0003677
Bach12g01706 266 MobiDBLite consensus disorder prediction 174 208 - -
Bach12g01706 266 Coils Coil 118 152 - -
Bach12g01706 266 Gene3D - 63 110 - -
Bach12g01706 266 Pfam Homeodomain 61 110 IPR001356 GO:0003677
Bach12g01706 266 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
Bach12g01706 266 MobiDBLite consensus disorder prediction 158 173 - -
Bach12g01706 266 FunFam homeobox-leucine zipper protein ATHB-6-like 60 106 - -
Bach12g01706 266 CDD homeodomain 57 113 IPR001356 GO:0003677
Bach12g01706 266 PRINTS Lambda-repressor HTH signature 92 108 IPR000047 GO:0003677
Bach12g01706 266 PRINTS Lambda-repressor HTH signature 83 92 IPR000047 GO:0003677
Bach12g01706 266 MobiDBLite consensus disorder prediction 158 208 - -
Bach12g01706 266 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 38 195 IPR045224 GO:0003700
Bach12g01706 266 SMART HOX_1 55 116 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01706 Bach-Chr12 12965542 12966645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01706 1 266 Homeobox Transcription Factor Family AT4G40060 41.000 3.20e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach12g01706 Homeodomain 2.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01706 K09338 - qsa:O6P43_015335 322.783