Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01688 ATGTCACTCGTGAGTTCGAAAGCGGAGATGAAACGGAAGGAGATGCAGAGGAAGAAGGCGAGGTCTGGTGGGTTTGAGTCCTTAGGTCTGAGTCCCAATGCTTACAAAGGAATCAAACGAAAAGGGTATAAAGTGCCCACCCCAATTCAGAGGAAAACTATGCCCATTATTCTTTCTGGGTCTGATGTTGTGGCGATGGCTCGTACTGGGTCTGGCAAGACCGCTGCTTTTCTCATCCCCATGCTTGAGCGTTTGAACCAGCATCTTCCTCAGGGAGGGGTTAGAGCTCTCATTCTGTCCCCCACTAGAGATTTGGCTCTTCAGACTTTGAAGTTCACCAAAGAGCTGGGCCATTTCACAGATCTTCGTATTAGTTTATTAGTTGGAGGGGATAGCATGGAAAGTCAATTTGAGGAATTGGCCCAGAACCCTGATATTATAATTGCAACACCTGGTAGGCTTATGCACCATTTGTCAGAAGTCGATGACATGTCATTGCGGGCAGTGGAGTATGTTGTTTTTGATGAGGCGGATTGTTTATTTGGCATGGGTTTTGCTCAGCAATTGCATCAAATTCTTGCACAGCTTGGTGAGAATCGTCAGACTTTGCTTTTCAGTGCTACACTACCCAGTGCCCTTGCTGAGTTTGCTAAGGCCGGTTTGCGAGACCCCCAACTTATTAGGCTGGATTTAGATACTAAGATTAGCCCTGACTTGAAGCTTGCCTTTTTCACCTTGCGGCAGGAAGAAAAGTACGCTGCATTACTTTATTTGATTAGGGAGCAAATTAGTTCCGATGAGCAGAGTTTAATATTTGTATCCACAAAGCATCATGTGGAATTTCTTAATACATTGTTCAGGGAAGAGAGTATTGAGACATCTGTATGTTATGGTGACATGGATCAAGATGCTCGCAAAATCCATATATCAAGGTTCAGGGCACGGAGGACGAAGTTTCTTATTGTGACGGATGTTGCAGCTCGGGGCATTGATATTCCATTACTTGATAATGTTATTAACTGGGACTTTCCTCCTAAGCCAAAAATATTTGTTCATCGTGTTGGAAGGGCTGCTAGAGCTGGTCGTACTGGCAGTGCTTATTCATTTGTGACACCAGAGGATATGCCTTACCTTTTAGATCTTCATCTATTTCTCTCCAAACCAATCAAAGCTGCTCCGACTGAGGAAGAGGTTTTGCAGGACATGGATGGAGTTATGTCCAAAATTGACCAAACAATAGCAAATGGAGGAACTGTCTATGGTCGTTTTCCCCAAAAACTCATTGACCTTGTTTCAGACAGAGTTCAGGAAGTCATTGCTACTTCTGCAGAACTGATTTCATTGCAGAAAACCTGTCAAAATGCATTCCGTTTATATTCAAAGACAAAACCCTTACCTGCAAAGGAGTCCATTAGAAGAGTAAAGGATTTACCCCAGGAGGGGTTACATCCAATATTCAAGAATATATTGGAAACTGGGGAGTTAATGGCACTTGCATTTTCGGAGCACTTGAAAAAGTTTAGGCCGAAGCAGACTATTTTGGAAGCTGACGGTGAAGCAGCTAAATCAAAGCATCTGCAGGGTACTTCTAAACAATGGGTTGATGTGATGAAGAGAAAAAGAGCCATTCATGAGAACATCATAAATAAGGTTCATGAGGAGCGCTCTAAGAGCCATATAGAAAAGGAGGAGGATCTATTGGAAATTTCTCCTTCCGTGGAAGACAAGAGTAAAGAGAGAAAAGTTTCAGTGGCTACAGGTTCTAAGAGAAAGCTACAAAGTTTCAAGGATGAGGAATACTATATAAGTTCCATACCCAAAAATCATCACATGGAATCAGGCCTTTCCGTAAGAGCTAATGAAGAATTTGGTTCAAATAGATTGGATGCAGCTGTCCTAGATCTTGTTGCAGATGATAGGACTGGCATTCAGAAACAAAAATCTGTATACCACTGGGACAAGAAAAGTAAAAAGTATATCAAGTTAAACAATGGTGAACGTGTTGCTGCAAATGGAAAGATAATAAAAACAGAGAGTGGTGCAAAGGTCAAGGCCAACAAGACTGGTATATATAAGAAGTGGAAAGAACGTTCGCACAATAAGATATCTCATAAGGGGACATATGGTGAAGGTGATGCTCAGGCATCCACAAGTTTGGCAGCATATCGTAAAGGTGGCCGTGGAAACTTTAAGCATGGCAAGAAGCAGAATTCAGTTCCCAATGCGAATGTGCGCTCAGAAATCAAAGATATAGAGCAAATTCGGAAAGAGAGGCAGAAGAAAGCCAACAGAATTTCGCATATGAAGAACAAGTCTTCAAAAGGTAAAAAATATGGTAAAAAAAGAAAGGCAAGGTAGAAGAGACGCTTTCCAGAGATCAAGCAAGGATAGTAAAAAGATTTTGTTGCCTACATTATGGAGATAGTTTTTGTCTGTTGTCAAAATTTCAGGATGAGATAGTGGTATTTTATTTTGGCCGGGAGGATATATTTGTAACTTTTGTCATCCATTAATTTATTTCTTTAATACAAGGTTCTCATATTATTGTTTGATATATATTTATTGAGC 2568 0.4112 MSLVSSKAEMKRKEMQRKKARSGGFESLGLSPNAYKGIKRKGYKVPTPIQRKTMPIILSGSDVVAMARTGSGKTAAFLIPMLERLNQHLPQGGVRALILSPTRDLALQTLKFTKELGHFTDLRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDDMSLRAVEYVVFDEADCLFGMGFAQQLHQILAQLGENRQTLLFSATLPSALAEFAKAGLRDPQLIRLDLDTKISPDLKLAFFTLRQEEKYAALLYLIREQISSDEQSLIFVSTKHHVEFLNTLFREESIETSVCYGDMDQDARKIHISRFRARRTKFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGSAYSFVTPEDMPYLLDLHLFLSKPIKAAPTEEEVLQDMDGVMSKIDQTIANGGTVYGRFPQKLIDLVSDRVQEVIATSAELISLQKTCQNAFRLYSKTKPLPAKESIRRVKDLPQEGLHPIFKNILETGELMALAFSEHLKKFRPKQTILEADGEAAKSKHLQGTSKQWVDVMKRKRAIHENIINKVHEERSKSHIEKEEDLLEISPSVEDKSKERKVSVATGSKRKLQSFKDEEYYISSIPKNHHMESGLSVRANEEFGSNRLDAAVLDLVADDRTGIQKQKSVYHWDKKSKKYIKLNNGERVAANGKIIKTESGAKVKANKTGIYKKWKERSHNKISHKGTYGEGDAQASTSLAAYRKGGRGNFKHGKKQNSVPNANVRSEIKDIEQIRKERQKKANRISHMKNKSSKGKKYGKKRKAR 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01688 785 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 54 227 IPR014001 -
Bach12g01688 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 379 IPR027417 -
Bach12g01688 785 CDD SF2_C_DEAD 246 370 - -
Bach12g01688 785 Pfam DEAD/DEAH box helicase 47 214 IPR011545 GO:0003676|GO:0005524
Bach12g01688 785 MobiDBLite consensus disorder prediction 1 27 - -
Bach12g01688 785 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 23 51 IPR014014 GO:0003724
Bach12g01688 785 SMART DBP10CT_2 634 697 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Bach12g01688 785 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 251 400 IPR001650 -
Bach12g01688 785 Gene3D - 242 471 IPR027417 -
Bach12g01688 785 MobiDBLite consensus disorder prediction 760 785 - -
Bach12g01688 785 SMART helicmild6 280 361 IPR001650 -
Bach12g01688 785 MobiDBLite consensus disorder prediction 7 21 - -
Bach12g01688 785 MobiDBLite consensus disorder prediction 724 785 - -
Bach12g01688 785 Coils Coil 751 771 - -
Bach12g01688 785 Gene3D - 2 230 IPR027417 -
Bach12g01688 785 Pfam DBP10CT (NUC160) domain 634 696 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Bach12g01688 785 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 9 700 - -
Bach12g01688 785 Pfam Helicase conserved C-terminal domain 250 361 IPR001650 -
Bach12g01688 785 SMART ultradead3 42 249 IPR014001 -
Bach12g01688 785 CDD DEADc_DDX54 23 228 IPR033517 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01688 Bach-Chr12 12445245 12450438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01688 25 394 Eukaryotic Initiation Factors Gene Family AT1G72730 33.333 6.33e-60 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01688 K14808 - gmx:100817417 1216.83