Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01651 ATGGAGGAAGGGAAACATAAGTCTAGGAAGGAAGATTCTGAGAGGAAGGAGGATGATTCTAAGAGGGGTCATCGTGATCGTGATAGAAATGGGGAAAGAGATAAGGATAGAGAAGAGAGGTACAGGGAGAGGGAGAAAGATAGGGAGAAGAGGGACCGGGAGAGCCGGCGGCATGAGAGGGCGAAGAGTAGTGATTCTGAAGATAGGCATGGTAAGGACAGGGAGAAGCGTAGAGATAGGAAAAGGGACAAGGAGGACAGGGACAGGGAGAGAGAGAGGGAAAGGGAGAAAGAGAAGGAGAGGAGAGACAAGGCAAGGGACAAAGAAAGAGAGAGGGAGAAGGAAAGAGAAAGGAGGGAAGATAGGGAGAGGGAAACAGGTAGGAGGGAGAGGAGAGTGCGTGAGAGGGAGAAGCATAGGGAAGTTGATAGTGACTGTAGTGATGATGACTTTAGGGAGAGGGATAGGAAGCGGCATAGGAAAGAGGATGATGATTACAAGAGGAGAGAGCGGGAAAGGAGCATCAGTAAATCAAACAGGCACAGTGTTGATATTGAAGATAGCCCAAGGAAGAAGAGTGGTGAAGATGACTCAGATACTAAAGAGAATAAAGAGAAAAAACCAACCCGTGAAGAGGAGATGGAAGATGAAAACAGGAGGTTGGATGACGAGATGGAAAAGAGGAGGAGGAGAGTTCAGGAGTGGCAAGAGTTGAGGAGGAAGAGGGAAGAAACTGAGAGAGAAAAGCGGGGTGAAGAAAGTGCTGAGGAGCCCAAGTCTGGAAGGGTATGGACACTTGAAGGGGAATCTGATGATGAAGAAGGTCTCACTACAGGGAAGCCAGATTCAGCCATGGATATAGATAGTGGTGAAAAGCCTGCTGATAAAGATTCAGGAGATTCAATGGTGGTTGATGTTGGTAATGGGGCAATTCCATCTGATTTACAGGATGGAACTGCTGGTGCTCCTGAAGATGAGGAAATTGATCCATTGGATGCTTTCATGAATTCAATAATGCCTGAAGTTGAAAAGCTGAATAATGCTGCGGCTCCTTCAACAGCTGATGTAAGTACTGACCTGAAGACCAAGGCTAAAGGGGATGAGCAAAGTAATGGTGAATGGCTGAAGAAAGGATCAAACAAGTCAATAGGGAGAATAATTCCTGGTGAAGAGTCTGACTCAGATTATGCAGATATGGAAAATGAAGGGGATCCATTAGAAGATGAAGATGATAACGAGTTCATGAAGAGAGTGAAGAAAACAAAAGCTGATAAACTTTCTATAGTTGACCATTCAAAGATTGATTATGAACCATTTAGGAAAAACTTTTATATAGAGGCGAAAGAGATCTCAAAGATGACTCCTGCAGAATTTGCAGCATACAGGAAGCAGTTGGAGTTGAAGATACACGGAAGGGATGTGCCCAAGCCTGTAAAATCATGGCACCAGACTGGACTCACTAGCAAAATTTTTGAGACAATAAAGAAGCTTAACTATGAAAAACCGATGCCTATTCAAGCTCAAGCATTGCCTGTAATTATGAGTGGTCGAGACTGCATAGGCATTGCAAAAACTGGGTCAGGCAAAACACTTGCCTTTGTTCTGCCAATGTTGAGGCACATTAAGGACCAGCCACCTGTTGTTGCTGGAGATGGACCAATTGGGCTTATAATGGCTCCTACAAGGGAGCTTGTTCAACAGATTCACAATGATATAAAGAAGTTTGCAAAGGTGTTGGGTCTCAGGTGTGTACCTGTCTATGGTGGTTCTGGTGTCGCCCAACAGATTAGCGAGTTGAAACGTGGTACAGAGATTGTGGTTTGTACACCAGGTAGAATGATTGACATACTTTGTACCAGTGGTGGAAAAATAACCAACTTGCGTAGAGTCACTTATCTGGTCATGGATGAGGCTGATCGAATGTTTGACATGGGCTTTGAACCTCAAATCACCCGAATTGTTCAGAACATTCGTCCAGATCGACAAACTGTTCTATTCTCTGCCACATTCCCTCGTCAGGTGGAAATTCTTGCGCGTAAAGTTTTGAATAAACCAGTTGAAATACAGCTTGGTGGGAGGAGTGTCGTGAACAAGGACATAACACAGTTAGTGGAGGTGAGGTCAGAAAGTGAGAGGTTCTTGAGGCTCTTAGAAATATTAGGTGAATGGCATGAGAAAGGAAAGATTTTAATATTTGTTCACTCACAGGTAAAATGTGATAATTTGTTCAAGGATTTACTTGCCCATGGTTATCCATGTCTTTCTCTTCATGGGGCTAAGGATCAGACAGATCGTGAATCCACAATTACTGATTTCAAAACCAATGTATGCAATTTGTTGATTGCAACTAGTGTTGCTGCTAGGGGATTAGATGTGAAGGAGCTTGACCTAGTTATTAATTTTGATGCTCCAAACCACTATGAAGATTATGTACATCGTGTTGGCCGTACTGGTCGAGCTGGGCGGAAGGGTTGTGCTATCACATTTATTTCTGAGGAAGATGCAAAATATGCTCCAGATCTGGTGAAAGCTTTGGAGTTGTCTGAACAAGCTGTTCCTGATGACCTAAAAGCTCTTGCCGATGGCTTTATGGCAAAGGTAAACCAAGGACTTGAGCAAGCTCATGGGAGTGGTTTTGGAGGAAGTGGCTATAAGTTTAATGAAGAGGAAGATGAAGTGAGGAGAGCAGAAAAGAAAGCACAAGCCAAAGAATATGGATATGAAGTCCAATCAGATTCTGAAGATGAAGATGAAGGTATTAGAAAGTCAGCAACTGACATCTCACATCAGGCTGCTATCGCTCGAGCTCTTGCTACTGCCTCCAAAACAAATTCATTAGCAACGTCTACTCCCTTCTCTGCTACACTCCCTATGCCATCTGTCCTTAATCTCCCATTACCAGGGCCTGCAACATCCATTCCCGTGACTGCAGTTCCCCATGTTCCCAATGAGGCAGCAGCTGCTCGGGCAGCTTTAGCTGCCATAAACCTGCAGCACAATTTAGCAAAGATACAAGCTGATGCACTGCCTGAGCATTATGAAGCAGAGTTGGAGATAAATGATTTCCCCCAAAATGCACGGTGGAAAGTCACACACAAGGAGACTTTGGGCCCAATTTCTGATTATACCGGAGCTGCTATCACCACTAGGGGACAGTATTACCCGCCAGGCAAGATCCCAGGACCTGGAGAGCGCAAACTTTACCTGTTCATTGAGGGTCCCAGTGAACAATCTGTTAAGAGAGCTAAAGCCGAGTTGAAGCGTGTTCTGGAAGACATCACGAATCAGGGTTTGCAGCTTCCTGGTGGAACTCAACCAGGCAAATACTCTGTTTTATAA 3339 0.445 MEEGKHKSRKEDSERKEDDSKRGHRDRDRNGERDKDREERYREREKDREKRDRESRRHERAKSSDSEDRHGKDREKRRDRKRDKEDRDREREREREKEKERRDKARDKEREREKERERREDRERETGRRERRVREREKHREVDSDCSDDDFRERDRKRHRKEDDDYKRRERERSISKSNRHSVDIEDSPRKKSGEDDSDTKENKEKKPTREEEMEDENRRLDDEMEKRRRRVQEWQELRRKREETEREKRGEESAEEPKSGRVWTLEGESDDEEGLTTGKPDSAMDIDSGEKPADKDSGDSMVVDVGNGAIPSDLQDGTAGAPEDEEIDPLDAFMNSIMPEVEKLNNAAAPSTADVSTDLKTKAKGDEQSNGEWLKKGSNKSIGRIIPGEESDSDYADMENEGDPLEDEDDNEFMKRVKKTKADKLSIVDHSKIDYEPFRKNFYIEAKEISKMTPAEFAAYRKQLELKIHGRDVPKPVKSWHQTGLTSKIFETIKKLNYEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHNDIKKFAKVLGLRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQLGGRSVVNKDITQLVEVRSESERFLRLLEILGEWHEKGKILIFVHSQVKCDNLFKDLLAHGYPCLSLHGAKDQTDRESTITDFKTNVCNLLIATSVAARGLDVKELDLVINFDAPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAKYAPDLVKALELSEQAVPDDLKALADGFMAKVNQGLEQAHGSGFGGSGYKFNEEEDEVRRAEKKAQAKEYGYEVQSDSEDEDEGIRKSATDISHQAAIARALATASKTNSLATSTPFSATLPMPSVLNLPLPGPATSIPVTAVPHVPNEAAAARAALAAINLQHNLAKIQADALPEHYEAELEINDFPQNARWKVTHKETLGPISDYTGAAITTRGQYYPPGKIPGPGERKLYLFIEGPSEQSVKRAKAELKRVLEDITNQGLQLPGGTQPGKYSVL 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01651 1112 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 510 688 IPR014001 -
Bach12g01651 1112 SMART ultradead3 498 703 IPR014001 -
Bach12g01651 1112 Pfam DEAD/DEAH box helicase 504 675 IPR011545 GO:0003676|GO:0005524
Bach12g01651 1112 MobiDBLite consensus disorder prediction 360 374 - -
Bach12g01651 1112 PANTHER RNA HELICASE 426 893 - -
Bach12g01651 1112 CDD SF2_C_DEAD 700 830 - -
Bach12g01651 1112 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 699 860 IPR001650 -
Bach12g01651 1112 FunFam ATP-dependent RNA helicase RhlB 692 863 - -
Bach12g01651 1112 SMART helicmild6 740 821 IPR001650 -
Bach12g01651 1112 Coils Coil 211 255 - -
Bach12g01651 1112 Gene3D - 431 689 IPR027417 -
Bach12g01651 1112 MobiDBLite consensus disorder prediction 1 299 - -
Bach12g01651 1112 Coils Coil 1076 1096 - -
Bach12g01651 1112 FunFam probable ATP-dependent RNA helicase DDX17 441 691 - -
Bach12g01651 1112 CDD DEADc_DDX46 468 689 - -
Bach12g01651 1112 Pfam Helicase conserved C-terminal domain 713 821 IPR001650 -
Bach12g01651 1112 MobiDBLite consensus disorder prediction 347 412 - -
Bach12g01651 1112 CDD KH-I_AtRH42_like 1010 1111 - -
Bach12g01651 1112 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 634 642 IPR000629 -
Bach12g01651 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 406 837 IPR027417 -
Bach12g01651 1112 Coils Coil 80 125 - -
Bach12g01651 1112 MobiDBLite consensus disorder prediction 393 409 - -
Bach12g01651 1112 MobiDBLite consensus disorder prediction 1 326 - -
Bach12g01651 1112 Gene3D - 690 863 IPR027417 -
Bach12g01651 1112 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 479 507 IPR014014 GO:0003724
Bach12g01651 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 626 860 IPR027417 -
Bach12g01651 1112 MobiDBLite consensus disorder prediction 895 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01651 Bach-Chr12 11992600 11995938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01651 477 841 Eukaryotic Initiation Factors Gene Family AT3G19760 32.240 5.63e-56 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01651 K12811 - gmx:100784306 1494.95