Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01628 ATGGATTCCTATCAAGAAAATCAATTTGAAGATGGGTTTGATCAGATTGAAGATAAACAAGGGTTAGGTCAAGAAGAGGAGCAGTTGAATGGATCTCCTGCTGATGAGGGGATAGTTGAGAAACCAGCTTCAACAATCAAAATCTGTAATTTTTGTGGCAAAACTTTCAACAACGGAAAAGCCTTGGGTGGACACAGAAGACATCACCTTCAAGCTCTGAGAAAAGGAAAGGCAGCAGCTGCAGCTCAATCCCACAAGGTGAAAATTCGTCTCCCTAAACATAGAAATTATGAGAATTCAAGTTCTGTCAATGGTGTTGGTGAAGATAATATTGTAAAGATGGAAAGTTTGATGCTTAATGGTGGAAAAACCACTTGTGATCTTTGCAACAAGGATTTCCCATCTAGGAAGTCCTATTATGGGCACATGAGAACCCACCCTGAGAGTGAAAGGGGCACTGTTTTACCTCCTGGTGATGATTCTAAGGAACTGAAAGAAGATGACTGTATTACTAGTAGTACAGTTATTGCACCACATGAATCACCTGTTGATTTAACAAAATCTTTATTACCAAGTTGGGCCAAGACCGATTTAAGGGGCAGGAAAAGCATTGGTGCAGTTGAGGCCGCTCAAAATCTCGTACATTTCTGTCGTGAAGCGTATTTTTCTGCGTCTAGCTCTCTTGTCTTTAGCTTGAGTCCTAACATGCTACCTCAAGCCGTGTCCACTAATAACACGGTTGAGGCTAAGAGTAGTACTTCTGGGGTTGCAATACAATGCAAGGAAAAGAAGGTTGACGATTCTCCGTCTGGGGAACAAAAAGTGAGGAAGAAAAAATTTCATAGAAGAGGTTCACTGAGTGGAGGAAAGGATGAGGTGGAGGTGGAGGAGGAGGGTGCTAATTGGGGTGAAGAGGAGTGTGAGAAGAATATGAAAGACGATGATAGTCAATTAGATGAAAGCAAGATAATGGTGATGAAGGAGAAGAAGAGAAAGAAGACATTGAAATTAATGTCTCCTCAAAGCTCAGAATATGAAGAAAACCCTCTCATCAAGACTCTGAAGGAACGAGATGGGTATAAATGCAGCATTTGTGGTAAAACTTTTGCATCTTTCCAAGCCCTAGGGGGACATAGATCCAGCCACAACAAAGGCAAGAGCATAGTTAGGACCATGGATGGGTCAGGTGATCATAACAATGGTGCAGCTGGTTTGATTCCTCAAGTGAATGAGACTAAGGGAAGTGAATTTAGAGGAGTAGTGGCAGAGGTTTTAGCTGCTGACACTGCACAGGCTCTTGGTGATCATCAGAGTAGGAGGTCCTGTTCTAGAAGATCATCAGCTGAGACACCATGGAGTGAAGAAGCTTCATCAGTTGGAACCAGTCTGTCTCATGCCATTCATCAAGAAGTTAGAAGGGCAAGTCCATCAGGTCCCAGAGTTCTTAATATTGATCTGAACGAGCTATATGTCATGGACGAACAAGGCAACTAA 1494 0.4244 MDSYQENQFEDGFDQIEDKQGLGQEEEQLNGSPADEGIVEKPASTIKICNFCGKTFNNGKALGGHRRHHLQALRKGKAAAAAQSHKVKIRLPKHRNYENSSSVNGVGEDNIVKMESLMLNGGKTTCDLCNKDFPSRKSYYGHMRTHPESERGTVLPPGDDSKELKEDDCITSSTVIAPHESPVDLTKSLLPSWAKTDLRGRKSIGAVEAAQNLVHFCREAYFSASSSLVFSLSPNMLPQAVSTNNTVEAKSSTSGVAIQCKEKKVDDSPSGEQKVRKKKFHRRGSLSGGKDEVEVEEEGANWGEEECEKNMKDDDSQLDESKIMVMKEKKRKKTLKLMSPQSSEYEENPLIKTLKERDGYKCSICGKTFASFQALGGHRSSHNKGKSIVRTMDGSGDHNNGAAGLIPQVNETKGSEFRGVVAEVLAADTAQALGDHQSRRSCSRRSSAETPWSEEASSVGTSLSHAIHQEVRRASPSGPRVLNIDLNELYVMDEQGN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01628 497 MobiDBLite consensus disorder prediction 1 37 - -
Bach12g01628 497 MobiDBLite consensus disorder prediction 262 315 - -
Bach12g01628 497 MobiDBLite consensus disorder prediction 143 165 - -
Bach12g01628 497 Pfam C2H2-type zinc finger 360 384 - -
Bach12g01628 497 Pfam C2H2-type zinc finger 125 148 - -
Bach12g01628 497 Pfam C2H2-type zinc finger 48 71 - -
Bach12g01628 497 MobiDBLite consensus disorder prediction 433 463 - -
Bach12g01628 497 SUPERFAMILY beta-beta-alpha zinc fingers 358 387 IPR036236 -
Bach12g01628 497 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 120 490 IPR044653 GO:0003700
Bach12g01628 497 ProSiteProfiles Zinc finger C2H2 type domain profile. 124 151 IPR013087 -
Bach12g01628 497 SMART c2h2final6 124 146 IPR013087 -
Bach12g01628 497 SMART c2h2final6 360 382 IPR013087 -
Bach12g01628 497 SMART c2h2final6 47 69 IPR013087 -
Bach12g01628 497 MobiDBLite consensus disorder prediction 444 463 - -
Bach12g01628 497 ProSiteProfiles Zinc finger C2H2 type domain profile. 360 387 IPR013087 -
Bach12g01628 497 ProSitePatterns Zinc finger C2H2 type domain signature. 126 146 IPR013087 -
Bach12g01628 497 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Bach12g01628 497 Gene3D Classic Zinc Finger 47 146 - -
Bach12g01628 497 ProSitePatterns Zinc finger C2H2 type domain signature. 362 382 IPR013087 -
Bach12g01628 497 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 69 IPR013087 -
Bach12g01628 497 SUPERFAMILY beta-beta-alpha zinc fingers 48 146 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01628 Bach-Chr12 11797279 11798874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01628 339 437 C2H2 Transcription Factor Family AT3G49930 37.624 1.65e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach12g01628 zf-C2H2_6 2.1e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01628 - - qsa:O6P43_020903 201.445