Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01626 ATGTCAAGTGGAGCAACACACTGGTGTTATGAGTGCAGGCAACCAATATGGATCGAAGGGAGAGATGTCACTTGCCCTCACTGTCATGAAGGCTTTGTGCAAGAACTTAATGAGATGCAAGGCGTTGCACCAGAGTTTCGTCAGCCACCTGATATTTTTGATGCTATAAATGCTTTCATGCAGCGGAGGGGTTCTGAACCAAGATTTGGTCTTATGGATGTTGTTGATAGTTTCATGAGGCAGAGAATGGCTGGACGGCACCCAAACTACGATGTTAGAGGGAGGTCTGGTTCTGCCCCAGTTCCTGAACAGCATTGGGATGTTCTTGGTTCTGGTCCTTATTTGATATTTCACGGTCAAGTTCCTGGAATCACTGTGACTAATGGTAGTCTAGGAGGTGGTGCTAGGCATGTAGATTTTGGCGAGTACTTTATGGGCCCTGGACTTGAAGAACTCATTGAACAGCTCTCCATGAATGATAGGCGTGGTCCACCTCCGGCCTCACGTTCTGCAATAGATGCAATGCCCACTATTAGGATAACACGGACACATCTTCGCTCTGATTCACACTGTCCTGTCTGTCAAGATAGATTTGAACTTGGCTCTGAAGCTAGGCAGATGCCATGTAACCATATATATCATTCTGACTGTATTGTTCCTTGGTTGGTCCAGCATAACTCATGTCCGGTTTGCCGCGTTGAGCTACCACCTCAAGGAGCTAATAGTTCTCGCAGCAGTCGAACTTGGGAAGTAAGGATTGATGAGGGCAGCACTGACAATAATAGCTCTAGGGGCAGAGAGAGTAGCAACCAGAACCATGGAAGGAGAAATCCACTATCATTTCTATGGCCATTTCGTTCTTCTAGTTCAAGCACCAATCATTATGCTGAGACTGGAGGAAACAGCTCTTCAACTACTCGTGACCACAACAATGGGACGGGTTATAATGGATGGTCCTTCGATTAA 966 0.4638 MSSGATHWCYECRQPIWIEGRDVTCPHCHEGFVQELNEMQGVAPEFRQPPDIFDAINAFMQRRGSEPRFGLMDVVDSFMRQRMAGRHPNYDVRGRSGSAPVPEQHWDVLGSGPYLIFHGQVPGITVTNGSLGGGARHVDFGEYFMGPGLEELIEQLSMNDRRGPPPASRSAIDAMPTIRITRTHLRSDSHCPVCQDRFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRVELPPQGANSSRSSRTWEVRIDEGSTDNNSSRGRESSNQNHGRRNPLSFLWPFRSSSSSTNHYAETGGNSSSTTRDHNNGTGYNGWSFD 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01626 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 89 236 - -
Bach12g01626 321 MobiDBLite consensus disorder prediction 262 278 - -
Bach12g01626 321 Pfam zinc-ribbon 6 36 IPR039525 GO:0061630
Bach12g01626 321 FunFam E3 ubiquitin-protein ligase RING1-like 154 238 - -
Bach12g01626 321 CDD RING-H2_RNF126-like 191 232 - -
Bach12g01626 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 238 IPR013083 -
Bach12g01626 321 MobiDBLite consensus disorder prediction 235 278 - -
Bach12g01626 321 ProSiteProfiles Zinc finger RING-type profile. 191 232 IPR001841 -
Bach12g01626 321 SMART ring_2 191 231 IPR001841 -
Bach12g01626 321 MobiDBLite consensus disorder prediction 292 321 - -
Bach12g01626 321 SUPERFAMILY RING/U-box 170 238 - -
Bach12g01626 321 Pfam Ring finger domain 190 232 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01626 Bach-Chr12 11778715 11779680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01626 138 247 C3H Transcription Factor Family AT5G01980 41.964 2.59e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01626 K11982 - gmx:100813674 507.294