Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01621 ATGAGGAAGAAGCTCGATACTCGTTTTCCGGCTGCTCGGATTAAGAAAATCATGCAAACAGATGAGGATGTTGGGAAGATTGCTATGGCTGTGCCTCTTCTAGTTTCTAAAGCGCTAGAACTATTTCTGCAAGATCTATGTGATCGTACATATGAGATAACACTGAGGAGGGGAGCAAAGACCATGAATTCCTTTCATCTAAAGCAGTGTGTACAGACTTTTAACGTCTTTGATTTTCTGAAGGATATTGCCAGCAAGGTTCCTGATTTGGGTGGTTCTGTTGCTACTGGTGATGATCGTACTGTAACTAAAAGAAGGAAAATTGTTGAAGAAGGCAATGAAAATGATGATGAGTTGAAGAGAAATAAGATGCAAGAGCTAGGACATACAAGTGGCAGAGGAAGAGGTAGGGGCAGGGGCAGAGGACGTGGACGAGGGAGTAGAACAGTTGATAGAGAGATGACTGCACAACATGCCAAGCTTGAAGATGATTTAGATGCATTAAAACAAAATGGCAATCACGATCAAAGTAGTGAAAGTCCAGACAATGAAACAGAATCCGAAGACGTGAAGCATAGTGGCAGAGGAAGAGGTAGGGGCAGGGGCAGAGGACGTGGACGAGGGAGTAGAACAGTTGATAGAGAGATGACTGCACAACATGCCAAGCTTGAAGATGATTTAGATGCATTAAAACAAAATGGCAATCACGATCAAAGTAGTGAAAGTCCAGACAATGAAACAGAATCCGAAGACATGAAGCATAGTGTTCCAGTCAGCAAACCAGCAGAAGTATCCATGCGAAATTTTGACTTGAATTTGGACCTGGACGAGAATGGGGATTCACTGGCTGTATCACCTCCTGCCCAAGATAGTTCGTCTGTGAAATTGAATACAGAACCGAAGCACGAGGAATTCCTTGGCTGGTCCTTGTCTGATGTAGAAAAAATGGCCATTGATCCTATGCAACTAGCCAACTTAAATAGAAGTATTGATGAAGATGAGGAAGATTATGATATAGAAAGCTAG 1026 0.4259 MRKKLDTRFPAARIKKIMQTDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQTFNVFDFLKDIASKVPDLGGSVATGDDRTVTKRRKIVEEGNENDDELKRNKMQELGHTSGRGRGRGRGRGRGRGSRTVDREMTAQHAKLEDDLDALKQNGNHDQSSESPDNETESEDVKHSGRGRGRGRGRGRGRGSRTVDREMTAQHAKLEDDLDALKQNGNHDQSSESPDNETESEDMKHSVPVSKPAEVSMRNFDLNLDLDENGDSLAVSPPAQDSSSVKLNTEPKHEEFLGWSLSDVEKMAIDPMQLANLNRSIDEDEEDYDIES 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01621 341 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 136 - -
Bach12g01621 341 MobiDBLite consensus disorder prediction 105 153 - -
Bach12g01621 341 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Bach12g01621 341 MobiDBLite consensus disorder prediction 241 257 - -
Bach12g01621 341 MobiDBLite consensus disorder prediction 169 215 - -
Bach12g01621 341 MobiDBLite consensus disorder prediction 105 133 - -
Bach12g01621 341 MobiDBLite consensus disorder prediction 231 298 - -
Bach12g01621 341 FunFam dr1-associated corepressor homolog 1 86 - -
Bach12g01621 341 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Bach12g01621 341 Coils Coil 151 171 - -
Bach12g01621 341 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Bach12g01621 341 MobiDBLite consensus disorder prediction 179 195 - -
Bach12g01621 341 Coils Coil 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01621 Bach-Chr12 11749347 11752004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01621 1 128 CCAAT-HAP5 Transcription Factor Family AT3G12480 68.889 1.69e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bach12g01621 CBFD_NFYB_HMF 4.3e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01621 K21752 - gmx:100814800 308.916