Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01602 ATGGCATTTACTTTCGAGAGGTGTGAGGAGAACATGGTGTTCACTGTGGAGTCTCAGAAGTCAGTGCCTGCACCCTTCTTGACAAAGACATACCAGATTGTTGATGATCCTCGCACTGATCACATTGTTTCGTGGGGTGAAGATGAAACTACATTTGTTGTTTGGAGGCCCCCTGAGTTTGCTAGGGATCTCCTTCCCAACTATTTCAAGCACAACAACTTCTCAAGCTTCGTAAGGCAGCTCAATACCTATGGTTTCAAGAAGATAGTGGCTGATAGGTGGGAATTTGCAAATGAGTACTTCAGAAAAGGAGCAAAGCACCTTTTATGTGAAATCCACAGAAGAAAAAACCCTCATCACCATCACCACCAACACTTCCATGATCAACCAACAAAGCTTCTTCAACCAGATGAAAGTCTTTCTTGGATTGACACAGCTCCATTACCATCTCCCAAACCAGGCACTGACATTCTATCAGCACTGTCTGAAGACAACCAAAGACTGAGGAGAAAGAACATCATGCTTATATCAGAACTCACCCACATGAAAAGTCTCTACAGTGATATTATATACTTCATCCAAAACCATGTAAAACCAGCTCCCCTTGAGCAAAGAAGCAGCAGTGCTATTCCCAAGCTTCTAGAATTGGAATCATTACCCCAAGCTCCTAATGTGATGATGGGTATTACAACTGTGAAAAATATTAGTTCTTTGGATAAGTCTTCAATCACTGCTAGTGAGGACACAAATAGTGGGGTGAAGCTTTTTGGAGTTCCCCTTAGTGGGAAAAAGAGATTGCATCCAGAAAACATTGATAAATAG 822 0.4197 MAFTFERCEENMVFTVESQKSVPAPFLTKTYQIVDDPRTDHIVSWGEDETTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKIVADRWEFANEYFRKGAKHLLCEIHRRKNPHHHHHQHFHDQPTKLLQPDESLSWIDTAPLPSPKPGTDILSALSEDNQRLRRKNIMLISELTHMKSLYSDIIYFIQNHVKPAPLEQRSSSAIPKLLELESLPQAPNVMMGITTVKNISSLDKSSITASEDTNSGVKLFGVPLSGKKRLHPENIDK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01602 273 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach12g01602 273 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach12g01602 273 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach12g01602 273 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach12g01602 273 Gene3D - 18 117 IPR036388 -
Bach12g01602 273 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
Bach12g01602 273 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 20 205 IPR027725 -
Bach12g01602 273 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach12g01602 273 FunFam Heat stress transcription factor B-4 18 116 - -
Bach12g01602 273 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01602 Bach-Chr12 11556285 11557632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01602 10 267 HSF AT1G46264 51.803 1.83e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bach12g01602 HSF_DNA-bind 7.9e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01602 K09419 - gmx:100806150 434.491