Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01598 ATGGGCAACTGCTGCTCCGGCAACACTGCAGATGCCCCGGCCGCCACGGACGACAAGGGAGAATCAAACCAAGAAAATAATGCCCAAAACAATGCAGAAACAGGAGGAGGAGGAGGAAGCAGCCACCCTGCAAACCCCACTAACCCACCAAAGCCATCATCTTCAGCCTCCCCTTCCAAAAACACCAAACCGGGTGCCACTGGGCCGGTCCTCGGCCGGCCAATGGAGGACGTACGTACCACTTACACCATTGGCAAAGAGCTGGGGAGAGGCCAATTTGGTGTGACACATCTATGCACCCACAAGGCCACGGGACAACAATATGCCTGCAAAACAATAGCAAAGAGAAAACTGGTGAATAAAGAGGATATAGAGGATGTTAGGAGGGAGGTCCAAATCATGCACCATTTGGCAGGGCAACCTAATATTGTGGAGCTAAAGGGTGCCTATGAAGACAAGCAATCGGTGCATCTGGTGATGGAGTTGTGTCATGGAGGAGAGCTCTTTGATCGTATCATTGCAAAGGGTCATTACACAGAACGTGCAGCAGCTTCGTTGTTAAGGACAATAGTTCAGATCGTCCACACTTGCCATTCCATGGGGGTCATTCATAGAGATCTTAAACCAGAGAATTTCCTCTTGCTCAATAAGGATGAAGATTCCCCTCTCAAGGCCACGGATTTTGGTCTATCCGTTTTTTACAAACAAGGAGATTCATTTAAAGATATTGTTGGTAGCGCTTATTACATTGCTCCTGAGGTTTTGAAGAGGAAATATGGCCCAGAGGTTGATATATGGAGTGTTGGTGTCATGCTTTACATTCTTCTGTGTGGGACTCCTCCATTTTGGGCAGAATCTGAACATGGAATTTTCAATGCCATCTTACGAGGCCACATTGACTTCACAAGCGATCCATGGCCATCCATTTCACCTGCAGCAAAAGATCTTGTGAAGAAAATGTTGACTTCAGATCCCAAGCAACGGTTGACAGCATACCAAGTCCTGAATCATCCATGGATCAAGGAGGATGGAGAAGCACCAGATAGACCTCTTGACAATGCAGTCATGAATAGGCTCAAACAGTTCAGAGCAATGAACAAATTCAAGCAAGTTGCTCTAAGGGTCATTGCTGGCTGCCTATCCGAGGAAGAAATCATGGGATTGAAGGAGATGTTCAAGGGAATGGACACTGACAACAGTGGAACCATTACACTTGAAGAGCTCAAGCAAGGGCTTGCTAAGCAGGGAACGAAGCTAACTGAACAAGAAGTCAAGCAATTACTGGAAGCTGCTGATGCTGATGGAAATGGAATAATAGATTATGACGAATTCATCACAGCAACAGTGCATATGAACCGAATGAACAGAGAAGAACATCTTTACACTGCCTTCCAATACTTCGATAAAGATAATAGCGGGTTCATTACCAATGAAGAACTAGAGCAAGCTCTCCATGAATATAACATGCATGATGGAAGGGACATCAAGGAAATTCTTTCCGAAGTTGATGGCGATAATGATGGTCGGATTAATTATGACGAGTTTGCAGCAATGATGAGAAAAGGAAATCCAGAAGCTCAAACCATGAGGAAGAGGCGTGATTCATTTGTTGCATGA 1617 0.4545 MGNCCSGNTADAPAATDDKGESNQENNAQNNAETGGGGGSSHPANPTNPPKPSSSASPSKNTKPGATGPVLGRPMEDVRTTYTIGKELGRGQFGVTHLCTHKATGQQYACKTIAKRKLVNKEDIEDVRREVQIMHHLAGQPNIVELKGAYEDKQSVHLVMELCHGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDEDSPLKATDFGLSVFYKQGDSFKDIVGSAYYIAPEVLKRKYGPEVDIWSVGVMLYILLCGTPPFWAESEHGIFNAILRGHIDFTSDPWPSISPAAKDLVKKMLTSDPKQRLTAYQVLNHPWIKEDGEAPDRPLDNAVMNRLKQFRAMNKFKQVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELKQGLAKQGTKLTEQEVKQLLEAADADGNGIIDYDEFITATVHMNRMNREEHLYTAFQYFDKDNSGFITNEELEQALHEYNMHDGRDIKEILSEVDGDNDGRINYDEFAAMMRKGNPEAQTMRKRRDSFVA 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01598 538 MobiDBLite consensus disorder prediction 19 44 - -
Bach12g01598 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Bach12g01598 538 CDD STKc_CAMK 82 339 - -
Bach12g01598 538 ProSitePatterns EF-hand calcium-binding domain. 432 444 IPR018247 -
Bach12g01598 538 FunFam calcium-dependent protein kinase 1 168 347 - -
Bach12g01598 538 ProSiteProfiles Protein kinase domain profile. 82 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01598 538 FunFam Calcium-dependent protein kinase 1 348 523 - -
Bach12g01598 538 SMART serkin_6 82 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01598 538 ProSitePatterns EF-hand calcium-binding domain. 396 408 IPR018247 -
Bach12g01598 538 ProSitePatterns Protein kinases ATP-binding region signature. 88 115 IPR017441 GO:0005524
Bach12g01598 538 ProSiteProfiles EF-hand calcium-binding domain profile. 494 525 IPR002048 GO:0005509
Bach12g01598 538 ProSiteProfiles EF-hand calcium-binding domain profile. 419 454 IPR002048 GO:0005509
Bach12g01598 538 ProSitePatterns EF-hand calcium-binding domain. 503 515 IPR018247 -
Bach12g01598 538 Gene3D - 381 449 - -
Bach12g01598 538 Gene3D - 358 519 - -
Bach12g01598 538 SUPERFAMILY EF-hand 380 521 IPR011992 -
Bach12g01598 538 Gene3D Transferase(Phosphotransferase) domain 1 168 348 - -
Bach12g01598 538 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Bach12g01598 538 MobiDBLite consensus disorder prediction 1 77 - -
Bach12g01598 538 SUPERFAMILY Protein kinase-like (PK-like) 65 366 IPR011009 -
Bach12g01598 538 Pfam Protein kinase domain 82 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01598 538 PANTHER SERINE/THREONINE-PROTEIN KINASE 77 515 - -
Bach12g01598 538 ProSitePatterns EF-hand calcium-binding domain. 468 480 IPR018247 -
Bach12g01598 538 ProSiteProfiles EF-hand calcium-binding domain profile. 383 418 IPR002048 GO:0005509
Bach12g01598 538 Gene3D Phosphorylase Kinase; domain 1 83 167 - -
Bach12g01598 538 SMART efh_1 387 415 IPR002048 GO:0005509
Bach12g01598 538 SMART efh_1 423 451 IPR002048 GO:0005509
Bach12g01598 538 SMART efh_1 459 487 IPR002048 GO:0005509
Bach12g01598 538 SMART efh_1 494 522 IPR002048 GO:0005509
Bach12g01598 538 Pfam EF-hand domain pair 457 520 IPR002048 GO:0005509
Bach12g01598 538 Pfam EF-hand domain pair 388 448 IPR002048 GO:0005509
Bach12g01598 538 FunFam Calcium-dependent protein kinase 1 84 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01598 Bach-Chr12 11522394 11525474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01598 1 536 EF-hand Containing Proteins AT5G12180 79.554 0.0 888
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bach12g01598 Pkinase 1.9e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01598 K13412 - qsa:O6P43_020973 908.672