Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01580 AATTTGCAGGTAGAAGGGAGATTCACCAGAATTTTTTACGCCATGGAAGAGTCAAGTGAATTGCATTCCGAAGAGAATAAAGTCTCTGGGGAGAAAAATAAGAAAAGAAGGCTCAAAACACCAGCCCAGGTTACAGCCTTGGAGAAATTTTATAATGAGCACAAATATCCTACAGAAGAAATGAAATTGGAACTTGCTGAAGAGTTGGGGTTGACAGAAAAACAAGTTTCCGGATGGTTTTGCCACAGAAGGTTAAAAGATAAAAGATTGTCGAAAGATGAAGCTTATGCTAACGGACGACAAGACCATTCAAGTGGTGTCATCCAGGATCGTGGCAGTGGGCTAGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTACAGGCTTCTTGATCCCAAAGAGGTTGAGAGTCATGGCCTCTATGGTCATGATTTTTCAGCTGCAGATTTGACCTATGAACATAGAAGCCGCTATACAGAAAACATTAGTGGAATGGATGACACATCATCTGAGAGTGGCTCATCTTTACAGTATAGGTCATTTTCTCAAGGTCAGGATCCATACAATATGGAGCCTTCAACATATCTAACACCAAACAGAGCTCTGCCACCCTTAAATCCCAAGGGTGCAACTAACATGGGATATAAACCATCAGGATATTTGAAAGTTAAGGGCGAGATAGATGCTATAACTTCTGTTAAGAAGCAAATAGGAAGGAATTATCGGGAAGATGGTCCACCGCTCAGCGTAGAATTTGATCCACTTCCTCCTGGGGCATTTGAGTATGAAACTGAAGATCCCATCCAAGAACCATACTATACTGCAAATCCTACTCTTCCAAGTTCACCAGAAATTTCTCCAGTGAAAAGGCAACTCAGTCTTAGCTCTAGATATGATTCATATAATACCAAATTTAGCTCCCAGGATTCGCATATGGAAGAAGCAGACATTGGCTCCTTCCATGACTCTGATTTCAAGGATAAGAGATTCCACCAGCATATAAAGCAAAGGCCAATTTTTCATGGTCACACCAATCCTTTGCCTGGCAAGAAGTCTTCCTTGGATTTGTATGAAGATTCTACTGGAGAAGTGTCTGCTTATAATAGCAAGAAGAATCATAGAATGGTTGCTAAGCATGGTATTGAAGGAATGAGATCTAATTCTGCTTCTAACCATAGTGATCACTATGAAGGGAAGGTTACTGCTAAGCAGGCAGACTCACCATTGCATGGCTATGAAACTATCAATCCAAAGAATGCGCAAAAGAGTGAATATGTAAAATCCAAGGCTTCAAATTCAATGCGTATTCCCTCTGTTTCTGGTGATGCTGAAGAAAGAGGGCTATCCACAATGACCGCAAAGGAACCAAAGTTTAATGGAGACAGAAAAGGGAGGAGAAAATATCAGGATTTAGATAGAGCCAGGATGCTTCCAAATGAAAACATGGTCGGAGAACAAGTTATGATTGATCAACCTCTGCAACACAATGTGAAACAGGCAACAGTTGCTGAGATGCAACCACAGATAAATAGGAGATCTGCTTTGGAGATGCCATCTAGTTTCAGTGAGGATGAAACCGCTGAAACGAGTTCCTCACTGAATTAA 1608 0.4111 MEESSELHSEENKVSGEKNKKRRLKTPAQVTALEKFYNEHKYPTEEMKLELAEELGLTEKQVSGWFCHRRLKDKRLSKDEAYANGRQDHSSGVIQDRGSGLGQDSCGSTKHGDYRLLDPKEVESHGLYGHDFSAADLTYEHRSRYTENISGMDDTSSESGSSLQYRSFSQGQDPYNMEPSTYLTPNRALPPLNPKGATNMGYKPSGYLKVKGEIDAITSVKKQIGRNYREDGPPLSVEFDPLPPGAFEYETEDPIQEPYYTANPTLPSSPEISPVKRQLSLSSRYDSYNTKFSSQDSHMEEADIGSFHDSDFKDKRFHQHIKQRPIFHGHTNPLPGKKSSLDLYEDSTGEVSAYNSKKNHRMVAKHGIEGMRSNSASNHSDHYEGKVTAKQADSPLHGYETINPKNAQKSEYVKSKASNSMRIPSVSGDAEERGLSTMTAKEPKFNGDRKGRRKYQDLDRARMLPNENMVGEQVMIDQPLQHNVKQATVAEMQPQINRRSALEMPSSFSEDETAETSSSLN 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01580 521 SMART HOX_1 18 80 IPR001356 GO:0003677
Bach12g01580 521 MobiDBLite consensus disorder prediction 88 106 - -
Bach12g01580 521 SUPERFAMILY Homeodomain-like 18 87 IPR009057 -
Bach12g01580 521 MobiDBLite consensus disorder prediction 1 27 - -
Bach12g01580 521 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Bach12g01580 521 MobiDBLite consensus disorder prediction 401 425 - -
Bach12g01580 521 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Bach12g01580 521 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 520 - -
Bach12g01580 521 MobiDBLite consensus disorder prediction 495 521 - -
Bach12g01580 521 MobiDBLite consensus disorder prediction 396 436 - -
Bach12g01580 521 MobiDBLite consensus disorder prediction 82 107 - -
Bach12g01580 521 CDD homeodomain 20 75 IPR001356 GO:0003677
Bach12g01580 521 Gene3D - 9 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01580 Bach-Chr12 11306859 11312389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01580 3 521 Homeobox Transcription Factor Family AT4G03250 39.106 7.92e-83 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bach12g01580 Homeodomain 1.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01580 - - gmx:100803515 719.153