Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01569 GTTTCCCTCACCTTCCCTCGCCTCCTTCACTGCTCCATAAACCCACTTAAACCCTTCCTCAAACGCTCTGATACCCTTCCCCTCTGTATCTCTGAACTCAGTGTTCTTATTACACAGAGATGATGAGTGTAATATTGAGAGGGTATTCATCTATAGCTTCAAGGCGCACTCTCGCTGCCTTGACTGCTGTGCAGTCGGTTCTGCACCACCACCAGCTCAGCTCCTCCTCCTCCGCCGCACCGCTTGTGGGAAATGGTCTGATTGGTAGTGAGATTGGATCATTTTCCGACTTTTTGGGGTCTACTGGCGGCATAGCGAGGGCCTTTCACTCGAAATCTGGTCCGTTGAATTTCCGGGCGTCATTGGTTTCTCAGACGGGGTTTGCTGCGGCGGATTACTCCTATGAAGAAGGGCTTAAAGGATGTAGTGACGAAGGCCTTGAGATCGCAAAGCTTGGGATTGCTCAGGAAATTATTTCTGCTTTGGCTAAAAGAGGTATCACGAAGCTCTTCCCCATTCAGAGGGCTGTGCTGGAACCTGCCATGCAAGGACGTGATATGATAGGTCGAGCTAGGACAGGAACGGGCAAAACTCTAGCTTTTGGGATACCCATCTTGGATAAGATCATTCAGTTTAATGCTAAGCATGGTCGAGGAAGGAATCCTCTGGCTTTGGCTTTGGCTCCAACCAGAGAACTTGCACGGCAGGTTGAGAAAGAATTCCAGGAGTCAGCACCTGGCTTGGATACAATTTGTGTCTATGGGGGTACACCCATATCTCGCCAAATGAGACAACTTGACTATGGTGTTGATATTGCAGTAGGCACACCTGGTCGAATTATTGATCTCCTCAACAGAGGTTCTCTAAACTTGAGTGAGGTTCAGTTTGTTGTTCTTGATGAAGCTGATCAGATGCTTCAAGTGGGTTTTCAGGAGGACGTTGAGAAAATCATGGAGAGGTTGCCTCCAAAACGTCAGACTCTGATGTTCTCTGCAACAATGCCATCTTGGATAAGGCAGCTTTCCCGCAAATACCTGAATGATCCCGCAATTATTGATCTTGTTGGAGATTCTGATCAGAAATTGCCAGATGGAATTTCACTATTCTCAATTGAATCCGATATGCACACAAAAGCAGGGATAATTGGGCCTCTAGTAACAGAACATGCAAAAGGAGGAAAGTGTATTGTTTTCACTCAAACCAAACGTGATGCTGATCGGTTATCATATGCCATGGCAAGAACCCTTAAATGTGAGGCCTTGCATGGTGATATTTCACAAAATCAGAGGGAACGCACTCTAGCTGGCTTCAGAAATGGTGAATTTAATGTCTTAGTGGCAACTGATGTCGCTTCACGTGGGCTTGATATACCAAATGTTGATCTTATAATACATTTTGAGCTACCCAATTCTTCAGAGATATTTGTTCATCGATCTGGACGAACAGGTCGTGCTGGGAAGAAAGGAACTGCTATTCTTATTTATTCCCAAGATCAATTCAGGACTGTTAGGACTATTGAGCGAGATGTAGGTTGCAGATTTACAGAGCTCCCTAGAATTGCTGTTAAGAGTGGATCAGTGGACATGTTTGGTGGTGGCATGGGGGGTGGTCAATTTGGTTCATTTGGAGGCATGCGGGACCGTCGACCTGGATTTGGCCGTTCCGGTTCCAGTGGCTTTGGGCGCTCCGGTTATGGTAATTCTGGTGGATCAAACTCTGGTGAGTATGGTTCCTTTGGTAGCTCAGGTCAACCAAGAAGTGGATTTGGCATGAGCCGCCCTGGAAATACTGGTGGATCTGGATTTAGCCGACCAGGTGGTTTTGGTAATTCAGATCGTTCTGGTGGTTTTGGCTCAAACCAATCTAGCAATTTTGGTAACAGAAGTTCAGGTCAAAGAAGTTCCTTTGGTGATCGCCTTGGTGCTTTAGGCAATGACAAGAGAAATGATCGGAACAATGGGGGAAGGCCATTCTAACTGAATCGCCATGGTGCATGTGTTTCTCCATTTGACAATTCCAAGGGCACTAGAATTATATCTTTTGGGGATGGCTATGGACTAAGTTTACTCTCTTGTGTTGCACTCTTAAACTGGTATACTAGATGACATACCAATAAACTGGCTCTTGTGGTATCGTCGTCATTCTAATCAAGCAAATTACATTTCCAATTTTGAAGAGGCAGCTTTGTGGAGGAACAGTAATCCAGTTTAATACGTCCAAATTCATAGAGGAGAAATTAGTAGTAGGAAGTGGTATGATGCTCTGCTGTTCATATTATAGTATTTATTTATTTATTTTATAAGAAATTCTCGTGTTCTAACTGATGGGATATGTGTTACATGAGTAAGTTGTTTTTGGGGGTTCTGGCAATAATATTGCTGTACTGGTTCCATTTCATTTACTCTATATATATATTGCATTACAAAGTTGAGATTATGTAATGAAGCTGGAGCAGAGAGTTGGCTAGCTAGAAAGAAGTAATCAAACCTAGGTATGTAATTCTG 2504 0.4413 MMSVILRGYSSIASRRTLAALTAVQSVLHHHQLSSSSSAAPLVGNGLIGSEIGSFSDFLGSTGGIARAFHSKSGPLNFRASLVSQTGFAAADYSYEEGLKGCSDEGLEIAKLGIAQEIISALAKRGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIQFNAKHGRGRNPLALALAPTRELARQVEKEFQESAPGLDTICVYGGTPISRQMRQLDYGVDIAVGTPGRIIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKIMERLPPKRQTLMFSATMPSWIRQLSRKYLNDPAIIDLVGDSDQKLPDGISLFSIESDMHTKAGIIGPLVTEHAKGGKCIVFTQTKRDADRLSYAMARTLKCEALHGDISQNQRERTLAGFRNGEFNVLVATDVASRGLDIPNVDLIIHFELPNSSEIFVHRSGRTGRAGKKGTAILIYSQDQFRTVRTIERDVGCRFTELPRIAVKSGSVDMFGGGMGGGQFGSFGGMRDRRPGFGRSGSSGFGRSGYGNSGGSNSGEYGSFGSSGQPRSGFGMSRPGNTGGSGFSRPGGFGNSDRSGGFGSNQSSNFGNRSSGQRSSFGDRLGALGNDKRNDRNNGGRPF 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01569 618 SMART helicmild6 366 446 IPR001650 -
Bach12g01569 618 SMART ultradead3 126 329 IPR014001 -
Bach12g01569 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 467 IPR027417 -
Bach12g01569 618 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 107 482 - -
Bach12g01569 618 MobiDBLite consensus disorder prediction 500 618 - -
Bach12g01569 618 CDD SF2_C_DEAD 348 455 - -
Bach12g01569 618 MobiDBLite consensus disorder prediction 520 559 - -
Bach12g01569 618 FunFam ATP-dependent RNA helicase RhlE 100 315 - -
Bach12g01569 618 Gene3D - 108 316 IPR027417 -
Bach12g01569 618 MobiDBLite consensus disorder prediction 573 596 - -
Bach12g01569 618 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 138 312 IPR014001 -
Bach12g01569 618 Pfam Helicase conserved C-terminal domain 345 446 IPR001650 -
Bach12g01569 618 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 341 486 IPR001650 -
Bach12g01569 618 MobiDBLite consensus disorder prediction 603 618 - -
Bach12g01569 618 Gene3D - 324 486 IPR027417 -
Bach12g01569 618 Pfam DEAD/DEAH box helicase 131 299 IPR011545 GO:0003676|GO:0005524
Bach12g01569 618 CDD DEADc 118 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01569 Bach-Chr12 11190562 11196968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01569 112 478 Eukaryotic Initiation Factors Gene Family AT3G19760 33.333 6.59e-68 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01569 - - qsa:O6P43_014734 791.186