Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01566 GTTTTGGCTAAAAGCTGTCTTAGTTGTTTGGAACTGCATCTGTATCTTAAAGCATGAGGCTTTCTGCTTCCGGATTTAGTCAACCGGCTGAAGAAGGGGAGGAAAAAATTTTGAATTCTGAACTGTGGCATGCATGTGCTGGCCCTCTGGTGTCTCTACCTCCTCTTGGAAGTCGTGTGGTCTACTTTCCCCAAGGTCACAGTGAGCAGGTTGCTGCTTCAACCAACAAGGAAGTGGATGCACATATTCCCAATTACCCTAACCTGCCACCACAGCTTATTTGTCAGCTTCACAATGTGACAATGCATGCAGATGCAGAAACAGATGAAGTATATACTCAGATGACTCTGCAACCTTTAAGTCCGCAAGAGCAAAAGGATGTGTATCTACTGCCTGCAGAACTGGGTACTCCCAGCAAACAACCAACCAACTACTTCTGTAAAACATTAACTGCAAGTGATACCAGCACTCATGGAGGATTCTCTGTTCCTCGAAGAGCAGCTGAAAAAGTCTTTCCTCCTCTTGATTACTCACAGCAGCCACCTGCACAAGAACTGATTGCCAGAGATCTTCATGATAATGAATGGAAATTTAGACATATATTTCGAGGTCAGCCCAAAAGGCATCTTCTAACTACAGGATGGAGTGTCTTTGTCAGTGCTAAGAGACTTGTTGCTGGTGATTCTGTCCTTTTTATCTGGAATGAAAAAAATCAGTTACTCTTGGGCATCCGGAGAGCAAATCGTCCACAGACTGTCATGCCATCGTCAGTTCTATCAAGTGATAGCATGCACATTGGTCTTCTTGCTGCTGCAGCTCATGCAGCTGCCACAAATAGCCGCTTTACTATATTCTATAACCCCAGGGCTAGCCCATCAGAATTTGTAATGCCCTTAGCCAAGTATGTTAAAGCTGTGCATCATACACGGGTTTCTGTTGGCATGCGATTTAGGATGCTCTTTGAGACAGAAGAATCAAGTGTACGTCGATACATGGGTACTATAACAGGCATTAGTGATTTAGATCCTGTTCGCTGGCCAAATTCACACTGGCGTTCTGTGAAGGTTGGTTGGGATGAATCTACTGCTGGTGAGAGGCAGCCAAGAGTTTCTCTGTGGGAGATTGAACCCTTGACCACATTCCCTATGTATCCATCCCCTTTCCCTCTGAGATTGAAGCGCCCTTGGCCATCAGGATTACCATATTTCCATGGTCTCAAGGATGGTGACATGGGCATTAGTTCTCCACTCATGTGGCTCCAAGGTGGGCTTGGAGATCAAGCAATGCCATCTTTAAACTTCCAGGGACTTGGAGTTACACCATGGATGCAGCCCAGACTGGATGCTTCTATACCAGGTCTCCAGCCAGAGATATATCAAGCAATGGCTGCTGCTGCACTCCAGGAAATGAGGACAGTGGATCCTTCAAAGTCATCTTCTCAATCTCTGCTGCAGTTCCAGCAGCCTTCAAGTGTACCCAGTGCTCCTGCTTCTGTAATCCAGAGGCAAGCGTTACAGCAGTCCCAGCCTCAAAATTCTCTTCTACAGAATTTTCAAGAAAACCAGGTGCCTGCTCAGCCTCAACTTCTGCAACAACAGTTGCAACGTTACCACCCATATTGTGATCAGCGGCAACTTCAGCATTCACAGCAACTAAACAATTTGCCTGTTCAGCCGCAGATGCTAAATGTCATCTCACCTTTTTCTAATTTTGCATCAGTTACTCAGTCTCAATCTACTTCCCTTCAGGCTATCGCTTCACATTGCCAGCAGCAGAGTTTTCCTGAACCTGTCAGGAACCATATTTCCAGCTCTGATGTTTCCCCCATCCATAGTCTGTTAGGATCATTCTCCCATGATGGAGCATCCCAGTTACAAAACTTGAATGGATCCAACAACATAATCTCTTCTGCTGCCTTACTACCCAAGCAAGTATCTGTTGAACCTCAGCTTCCATCTGCCGCAGCTCAGTGTGTACTGCCCCAGGTGGAACACTTGGGAACACCACAGACAAATGTGTCTGAACTTGCTGCTTTGCCACCATTTCCAGGGAGAGACTTTTCTGCATACCAAGGTGCTGCTGATCCTCAGAGCAATCTTTTGTTTGGGGTTAATATTGATTCTTCTTCTCTTATGCTACAAAATGGCATTCCAGACCTGAAAAATGTTGGCAATGAGAATGATTCCTTGTCAATGCCATTTTCTTCTTCAAATTTTGCTGGTACTACAGGCACTGATTTTCCACCAAGTTCAGGCATGACAACTTCTAGCTGTGTGGATGAATCAGGCTTCTTGCAGTCTTCTGAAAATGTAGACCAAGCAAATACACCAACCAGAACCTTTGTCAAGGTTCACAAGTCAGGGTCCTTTGGGAGGTCACTGGACATTTCTAAGTTTAGCAGCTATGATGAACTGCGCAGTGAGCTCGCACGCATGTTTGGCCTTGAAGGCCAACTAGAGGACCCTCAGAGATCAGGCTGGCAGCTTGTATTTGGTGACCGGGCGAATGATGTTCTTCTCCTTGGCGATGACCCATGGCAGGAGTTTGTGAACAATGTGTGGTACATCAAGATACTGTCTCCTTTTGAAGTGCAACAAATGGGCAAAGAAGGTCTTAATCCTGCTACTTCTGCGCTGAGTCACAAGCTTTCTACTACTAGGAACAACACCTGTGATACCTATGTTAGTCGACAAGAGTTTAGAAGTTCAAGCAATGGTATTGCATCCATGGGTTCCCTTGAATACTAA 2747 0.4554 MRLSASGFSQPAEEGEEKILNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNVTMHADAETDEVYTQMTLQPLSPQEQKDVYLLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVMPLAKYVKAVHHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPSGLPYFHGLKDGDMGISSPLMWLQGGLGDQAMPSLNFQGLGVTPWMQPRLDASIPGLQPEIYQAMAAAALQEMRTVDPSKSSSQSLLQFQQPSSVPSAPASVIQRQALQQSQPQNSLLQNFQENQVPAQPQLLQQQLQRYHPYCDQRQLQHSQQLNNLPVQPQMLNVISPFSNFASVTQSQSTSLQAIASHCQQQSFPEPVRNHISSSDVSPIHSLLGSFSHDGASQLQNLNGSNNIISSAALLPKQVSVEPQLPSAAAQCVLPQVEHLGTPQTNVSELAALPPFPGRDFSAYQGAADPQSNLLFGVNIDSSSLMLQNGIPDLKNVGNENDSLSMPFSSSNFAGTTGTDFPPSSGMTTSSCVDESGFLQSSENVDQANTPTRTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFGDRANDVLLLGDDPWQEFVNNVWYIKILSPFEVQQMGKEGLNPATSALSHKLSTTRNNTCDTYVSRQEFRSSSNGIASMGSLEY 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01566 897 ProSiteProfiles PB1 domain profile. 761 846 IPR000270 GO:0005515
Bach12g01566 897 Gene3D - 757 850 - -
Bach12g01566 897 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Bach12g01566 897 FunFam Auxin response factor 756 850 - -
Bach12g01566 897 Gene3D - 292 364 - -
Bach12g01566 897 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 851 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach12g01566 897 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach12g01566 897 SUPERFAMILY DNA-binding pseudobarrel domain 113 257 IPR015300 -
Bach12g01566 897 FunFam Auxin response factor 126 230 - -
Bach12g01566 897 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Bach12g01566 897 CDD B3_DNA 127 228 IPR003340 GO:0003677
Bach12g01566 897 Gene3D - 126 229 IPR015300 -
Bach12g01566 897 SMART B3_2 128 230 IPR003340 GO:0003677
Bach12g01566 897 Pfam AUX/IAA family 751 843 IPR033389 -
Bach12g01566 897 SUPERFAMILY CAD & PB1 domains 754 835 - -
Bach12g01566 897 FunFam Auxin response factor 292 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01566 Bach-Chr12 11158407 11166519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01566 1 485 B3 DNA Binding Superfamily AT1G30330 84.286 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach12g01566 AUX_IAA 6.9e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01566 - - gmx:100810798 1491.09