Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01563 ATGAATGGTGGCGTTTCTGATTGGTATTTTGAGAATGATACCTGCATCACCAATCAAAAGGGGGCCATTGGGCCGGAACAAGAACTTGTAGAACTTTTATGGCGAAACGGGCAGGTAGTTATGCACAACCAAACACAAGGTAAACCAATGATGAATTCTACTGACTCAAGACAGTTTCAGAAAAATGATCAAGCAACATTTAGCACTGGTGGATCATACGGAAACTCTAGTAATTTGATTCAAGGAGATGAGACAGTCTCGTGGATCCAATACCCACTTGAGGATCCATTGAAGCAAGAATTCTTTTCTAACTTTCTTACAGAGCTACCATCCTGTGAAACTCACTCTGATAAGCCAATCAAGCAATTTGAAGGAAAGTTTGCCAAATTTGGTGCCATTAGTACACCACGTGTCAATGGAAGTTCTCAACCTCCTAATACAAAACCTTCCTTTGTTCAGGAATTCTCAGGAAATCCCATACCTGCTCCAAGATTTCATTTACCTGATTCATCTCAGAAAAACATTGAACCAGGTCGATCTCAAAAAATTTTCAATTTTCCCCATTTTTCAGCACCCCCTAAGGTTGTTTCCGCCTCTTCTAATGAACAATTTGGAGATAAAGGTACTAATAATTTGTTGCAAAGTCAGACTAGAGAGGGCTCAGTGATGACAGTTGGGTCAAGTCACTGTGGCAGCAACCGAATCCCTCAAGATCCAGATGTAAGCTGGGCATCAAGCAATGGTGTTTGGACTACTGCTGTATCTGCTGAGCCCGAACCCCTCAGGGATGATGTGCACGGACCTATTCCTCAGAGTGATAAAGGGAAATCAGAGACACTTGAACCAACAGTTGCTTCATCTTCTGGTGGTTCAGGCAGTGGTCTTGGAAGAACTGGTTCCCAATCTACGAGGATCCATGGCCAGAAAAGGAAAGAGATAGATGTAGAAGAATCAGAGGAACAAAGTGAGGCTACAGAACTCAAATCAGCAGCTGGAAACAAGTCATCTCAGCGGACAGGGTCATCCCGGAGGAATCGTGCAGCTGAAGTGCATAATCTCTCTGAAAGGAGACGAAGAGATAGGATCAATGAGAAGATGAGGGCGTTGCAACAACTCATACCTCACAGCAACAAGACAGACAAAGCATCAATGCTGGATGAGGCAATAGAATACTTGAAATCACTTCAGTTACAACTTCAGGTTATGTGGATGGGAACTGGCATGACACCGGTGATGTTTCCCGGAGTTCAGCACTACATGTCACAGATGGGCATGGGAATGGCTCCACCTTCTTTGCCTCCTATTCACAACATGATGCATTTACCAAGAGTGCCACTTGATCAGTCCATAACTGCGGCTCAGACCCCAAACCAAACTGTGATGTCCCAAAATCCTGTTTTGGGTGCCTTTAATTACCAAAATCAGATGCGAAATCCTTCTCTTTCAGAGCAATATGCCCGTTACATGGGCTATCATCTTATGCAAAGTGCCTCTCAGCCGATGAATGCATTCAGATATGGTCCCCAGGCAGTACAACACAGTCAAGCAATGACTCCACTAATCAATAGTAATGGACCCCTAAGTGGAGCAGTTAATGCTGACGACACTGTAAGAGGCAAAATGGTTTCTTCCAGTTTCAATAATAGCAATACGGCCTGA 1659 0.4388 MNGGVSDWYFENDTCITNQKGAIGPEQELVELLWRNGQVVMHNQTQGKPMMNSTDSRQFQKNDQATFSTGGSYGNSSNLIQGDETVSWIQYPLEDPLKQEFFSNFLTELPSCETHSDKPIKQFEGKFAKFGAISTPRVNGSSQPPNTKPSFVQEFSGNPIPAPRFHLPDSSQKNIEPGRSQKIFNFPHFSAPPKVVSASSNEQFGDKGTNNLLQSQTREGSVMTVGSSHCGSNRIPQDPDVSWASSNGVWTTAVSAEPEPLRDDVHGPIPQSDKGKSETLEPTVASSSGGSGSGLGRTGSQSTRIHGQKRKEIDVEESEEQSEATELKSAAGNKSSQRTGSSRRNRAAEVHNLSERRRRDRINEKMRALQQLIPHSNKTDKASMLDEAIEYLKSLQLQLQVMWMGTGMTPVMFPGVQHYMSQMGMGMAPPSLPPIHNMMHLPRVPLDQSITAAQTPNQTVMSQNPVLGAFNYQNQMRNPSLSEQYARYMGYHLMQSASQPMNAFRYGPQAVQHSQAMTPLINSNGPLSGAVNADDTVRGKMVSSSFNNSNTA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01563 552 MobiDBLite consensus disorder prediction 344 361 - -
Bach12g01563 552 SMART finulus 352 401 IPR011598 GO:0046983
Bach12g01563 552 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 343 410 IPR036638 GO:0046983
Bach12g01563 552 MobiDBLite consensus disorder prediction 255 361 - -
Bach12g01563 552 FunFam Basic helix-loop-helix transcription factor 341 404 - -
Bach12g01563 552 CDD bHLH_AtPIF_like 346 409 IPR047265 -
Bach12g01563 552 Pfam Helix-loop-helix DNA-binding domain 350 396 IPR011598 GO:0046983
Bach12g01563 552 PANTHER TRANSCRIPTION FACTOR PIF3 17 519 IPR044273 GO:0003700|GO:0006355
Bach12g01563 552 Gene3D - 341 402 IPR036638 GO:0046983
Bach12g01563 552 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 346 395 IPR011598 GO:0046983
Bach12g01563 552 MobiDBLite consensus disorder prediction 195 243 - -
Bach12g01563 552 MobiDBLite consensus disorder prediction 325 343 - -
Bach12g01563 552 MobiDBLite consensus disorder prediction 276 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01563 Bach-Chr12 11129696 11133914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01563 8 515 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 35.539 1.12e-58 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach12g01563 HLH 2.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01563 K16189 - gmx:100784531 701.434