Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01555 ATGGAGGAGCAGTTGCAAGGCTTATCTCTGGTAGAAGAGGAAGATGAGGGATTAGTCTTTGATGTTGAGCAGAACCAGGAGTCTACAGATAATCTGGAACTCTGTTTGGTGGGACGATTTCTCACGGACAAAGTGCTTCGGGTTACAGTTATGAAGGACAGAATGGCCAGCATTTGGAGACCAGGCAGAGGGGTAACCATCAGGGAGCTAAACACAGGACTGTTCTTGTTCCAGTTCTACCACAAAGTGGATTGCACAAGGGTACTAAAGGGAGGACCATGGAGTTTCGATAACCACACTCTCATCATGGAACAAGTCAAACCAGGAGACGTGGTAAGTGAAATCCCACTATTTCATGTCTGCTGCTGGGTGCAAATACACGATCTACCAGCGGGGTTTATCACCCCAATAGTTGGAAAACATCTGGGTAATTACATAGGGTCATTCTTGGAGTATGACCAAAGCAACAATAAGGGAGGCTGGAGAACGTTTATACGAGTGAGGGTTAGGCTAGATGTTCGAATTCCTTTGAAAAAAGATAAGAAGCACTTTTGTGAGAAGTTGTTCTCATTGGAAGAGGATAACGGAGTTAGAGAATGGGGTCCGGAGTTGAGGGTGGATATTCGGAGGGAAGCAAGTTCAAGATGGCTAAAAAAGGAGAAACCAGAAAGAGAAATAGAAGCCAACAATGACAAAGCTACTAAAGACAAAAACATAGGTGGGGTCACAGACAACCATCAGGGAGGGGGTATAGGAGGGTCTGGAACAGAAGGGATGGTCATAGAGGAAGAAGAAAGCAGGCAGGCCAGGAAAAATCAAATCATTAAAGGTAAACAACCTTTGCAAATAGCAGCTCCCTCAATGGAGATAAGTGCAGTGGAGATGCCTTTTAACACGGAAGACCAGTCTGAGAGGAAAAGGAGGAGAGGAGGCCTGCCAGGACCAATGAGTTGTATTAGTTGGAATTGCCGAGGCCTGGGTAACCTGAGGGCAGTTCCGGTGCTGAAGGACATCATCCGATCCAACAAAGCGGATTTGGTGTTCCTTTTTGAGACTTTGGCTAACAAAAGCAAGGTGGAAGAAGTCTGTAGAAGAGTCAAGCTGGATTATTCTTTCTCAGTAGATAGAGAAGGTAGGGGTGGAGGAATAGCTATGATGTGGAGAAAGGAAGTTAATTGTCAGATTTTATCTGCGTCTAGGAACTATATAGATGTGGAGATAAGCGATGCTAAGGTGGGTAGATGGAGACTAACGGGGTTTTATGGGCACCCTGATAGAAGTCAAAGAAGGGAGTCTTGGAATCTCCTAAGACAGCTGCACTCCATTTCTACTCTTCCGTGGTGCATCATAGGGGACTTCAATGACATCCTATCTTCTGAGGATAAGAGGGGAAGAGTTGAGCATCCTCAATGGCTTTTGCAGGGGTTTAGGGAGGCGATGGCTGACAGTGGCTTAGTTGACATCCCCCTTGAAGGCTATCCCTTCACTTGGTCTAGAAGTAGAGGCACGGTTAATGCTGTTGAGGAAAGATTGGATAGAGCCATGGCAACGGATCAATGGCTCCTCCTATTCCAGAATGCGAGTCTACACAACTTGGTGGCTCCCATCTCTGACCATAACCCTTTAGTGCTAAAGCTTTCTAATTACAAAAAAAGGGGTATTAGAAGAAAGTTCAGGTTTGAGAATGCCTGGCTAGCAGAAGAAGGTCTGGAGGAGGTGGTGAAGGGTGGTTGGAATCTAGAAAGTAATGTGGAGGTTTCTAAGAGACTTAACAACTGTTCGGAGAAGTTGGAAAGTTGGGGATGTGGTTTAAAGACCAAATTTAGGAGAGAGGTGAATGCAGTCAAAGAGGAATTGGAGTGGCTTAGGGGAAGGATGGATCAAGACTCAGTGATTCACTTCAATTCGAGGAAGACACATCTTGCTACGCTTTTGGTTCAGGAAGATCAGTACTGGAGACAAAGAGCCAAAGTGCACTGGCTCAAGGATGGAGATAGCAATACAAAATTCTTTCATTGTATGGCTTCATGGAGGAAGAAGAGGAATGGCATTCAACAAATTGCTAATGAGGAGGGAGTTGTAGTAGGAAATCAGCAAGGCATATGCAACATTGTCAAGGATTATTTCAACAAACTATTCCATCCCTCAGCTAGCTGTTACAATGGGGTTACAGATGGCATTATGCCTTCCGTGGGAGAAAGAGAAAATGAGAGACTTATATCTCCTTTTTCCAAAAAGGAGTTTCGTGAGGCTTTATATCAAATGCATCCAGACAAATCCCCTGGCCCTGATGGACTAAATGCAGCCTTCTATAGAAGATTCTGGAACCTCTGTGGGGACGAAGTGACTAAGGCCTGCAGTAAATGGCTCAATGAAGGTAATCTTCCTCCTCTAATCAATGATACTACAATTGTTCTTATTCCCAAGAATGATCATCCTAGTTGCATCAAAGATTATAGGCCTATATCACTTTGTAATGTCATTTACAAGATTTTATCTAAAGTGTTGGCAAATAGACTGAAAGGGGTTATGCCTAATATTATTTCTGAGGAGCAATCTGCTTTTGTGAAAGGAAGATCTATTCTTGATAATATGTTAATTGCTTCTGAAATTACTCACTACTTGAAGAATAAAAGGAGAGGAAAAGTTGGGGAACTTGCTTTGAAAATAAATATTAGTAAGGCCTTTAACAGAGTGGACTGGGGTTTTCTCAAAACCATGATGGTGAAAATGGGGTTCCATGACAAATGGGTCAGATGGATTATGATGTGTGTGGAAACTGTTAATTTCTCTATTAGAGTTAATGATAGCCTTGTGGGTCCAATAAGGCCTGGAAGAGGACTTAGGCAAGGTGACCCTTTATCACCATTCCTCTTCTTGATATGCTCTGAAGGGTTGAGCTCTTTAATTCATAGAGCTGAAAGAGAAGGAAGTATCCATGGGATTGCCATCTGTAGAAGGGCTCCGAGAATCTCTCATCTGCTGTTTGCAGATGACTGCTTCTTGTTCTGTAGAGCTACGGTTGATGAGGTTGAAGCCCTCAAGCAAGTGCTCCAAGTCTATGAAGAGGCGTCTGGCCAGGCTATTAATTTAAACAAGAGCAGGAACAGGAACAATGAAGCTGCAGAAGTTTTAGATTCTTCTGAATGCGAAATTGCTAAATATGTGAGGAAGATTATCGCAGCAGAGAACGCAAACTCGCAACAACGAGAAGAACAAGAGAGAAACGACTCCTTTACGGTATCGTACCTCAGAAATTCATGTGGGTTATCCTTCAAAGTAGCTATTGAAGCATCCAAAAAGGTGCGATTGAAAGACCCAAACAACCCAGATTCCGTGCGTAATCTTCTTCGGAACTATGGATTCTCCAAAACCCACATATCGAAACTCGTGGGAAGACGCCCTAGAGTGCTTTTAGCAAATCCTGAGACGACCCTTTTGCCCAAGCTTACATTTTTCCGTTCTATTGGGCTTTCATCCACTGACATCCCAGAACTCCTCAGTAGCGTCCCAAAACTCGTAGAATGCAGCTTAAAGAAAGCTTTAATCCCCTGTTATGAGGTACTTAAGAGTGTGTTTGCTGGTGATGGTGAGAAAATACTTAGTATCATTAAGTCCTCAAAAAATCTTTCTTATGCGTCGTATGAGAGAAATTTGCTCCCCAACATTGAGGTTTTAAGACAAGCTGGAGTGCCTCAATCTTCTGTCTCTTTTTTGGTAGCTAATTATTCACAAGTAGCTTTTACTCAGCATAAAAAGTTCGTTGAATGTGTCAAGTCGGTCGAGGAAATGGGACTTAACCCTTCTAGAATAACATTTATTGAGATGGTCCGGGACATCAGAAGGATGAAGAAATCAAACTGGGAATCTAAATTGCGTGTCTATGAGAGATGTGGTTGGTCCAAGGAAGTCACTATTTTAGCATTCAAAAGGTTTCGAAATTGTATGTTGTATTCAGAGGAGAAAATCACAAAAACGATCAAGTTTCTTGTTGATGAAATGGGTTGGTCATCAGAAGATATCGCAATAAGCCCAATGATTCTCAGTTACAGCTTGGAGAAGAGGACTATCCCTAGATGTTCAGTGGTGAAAATTTTGAGAATGAAGGGTTTAATCAAGAAGGAATTGAGCTTAACTTCGATTATTGCTATTAGTGAGAAGAAGTTCTTAAAGAGATATGTGATCCGGTTTCAGGAAGATGTCCCTCAGTTGTTGGAAATCTATAATGGCCAAATTGATCCTCTGTGTGGAATGCAGTCCTAG 4263 0.4267 MEEQLQGLSLVEEEDEGLVFDVEQNQESTDNLELCLVGRFLTDKVLRVTVMKDRMASIWRPGRGVTIRELNTGLFLFQFYHKVDCTRVLKGGPWSFDNHTLIMEQVKPGDVVSEIPLFHVCCWVQIHDLPAGFITPIVGKHLGNYIGSFLEYDQSNNKGGWRTFIRVRVRLDVRIPLKKDKKHFCEKLFSLEEDNGVREWGPELRVDIRREASSRWLKKEKPEREIEANNDKATKDKNIGGVTDNHQGGGIGGSGTEGMVIEEEESRQARKNQIIKGKQPLQIAAPSMEISAVEMPFNTEDQSERKRRRGGLPGPMSCISWNCRGLGNLRAVPVLKDIIRSNKADLVFLFETLANKSKVEEVCRRVKLDYSFSVDREGRGGGIAMMWRKEVNCQILSASRNYIDVEISDAKVGRWRLTGFYGHPDRSQRRESWNLLRQLHSISTLPWCIIGDFNDILSSEDKRGRVEHPQWLLQGFREAMADSGLVDIPLEGYPFTWSRSRGTVNAVEERLDRAMATDQWLLLFQNASLHNLVAPISDHNPLVLKLSNYKKRGIRRKFRFENAWLAEEGLEEVVKGGWNLESNVEVSKRLNNCSEKLESWGCGLKTKFRREVNAVKEELEWLRGRMDQDSVIHFNSRKTHLATLLVQEDQYWRQRAKVHWLKDGDSNTKFFHCMASWRKKRNGIQQIANEEGVVVGNQQGICNIVKDYFNKLFHPSASCYNGVTDGIMPSVGERENERLISPFSKKEFREALYQMHPDKSPGPDGLNAAFYRRFWNLCGDEVTKACSKWLNEGNLPPLINDTTIVLIPKNDHPSCIKDYRPISLCNVIYKILSKVLANRLKGVMPNIISEEQSAFVKGRSILDNMLIASEITHYLKNKRRGKVGELALKINISKAFNRVDWGFLKTMMVKMGFHDKWVRWIMMCVETVNFSIRVNDSLVGPIRPGRGLRQGDPLSPFLFLICSEGLSSLIHRAEREGSIHGIAICRRAPRISHLLFADDCFLFCRATVDEVEALKQVLQVYEEASGQAINLNKSRNRNNEAAEVLDSSECEIAKYVRKIIAAENANSQQREEQERNDSFTVSYLRNSCGLSFKVAIEASKKVRLKDPNNPDSVRNLLRNYGFSKTHISKLVGRRPRVLLANPETTLLPKLTFFRSIGLSSTDIPELLSSVPKLVECSLKKALIPCYEVLKSVFAGDGEKILSIIKSSKNLSYASYERNLLPNIEVLRQAGVPQSSVSFLVANYSQVAFTQHKKFVECVKSVEEMGLNPSRITFIEMVRDIRRMKKSNWESKLRVYERCGWSKEVTILAFKRFRNCMLYSEEKITKTIKFLVDEMGWSSEDIAISPMILSYSLEKRTIPRCSVVKILRMKGLIKKELSLTSIIAISEKKFLKRYVIRFQEDVPQLLEIYNGQIDPLCGMQS 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01555 1420 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 807 1036 IPR000477 -
Bach12g01555 1420 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 414 1036 - -
Bach12g01555 1420 Pfam Domain of unknown function (DUF4283) 26 169 IPR025558 -
Bach12g01555 1420 MobiDBLite consensus disorder prediction 234 256 - -
Bach12g01555 1420 Pfam Endonuclease/Exonuclease/phosphatase family 320 539 IPR005135 GO:0003824
Bach12g01555 1420 Gene3D Endonuclease/exonuclease/phosphatase 315 546 IPR036691 -
Bach12g01555 1420 CDD RT_nLTR_like 801 1035 - -
Bach12g01555 1420 ProSiteProfiles Reverse transcriptase (RT) catalytic domain profile. 788 1060 IPR000477 -
Bach12g01555 1420 FunFam Mitochondrial transcription termination factor-like 1178 1401 - -
Bach12g01555 1420 SUPERFAMILY DNase I-like 314 546 IPR036691 -
Bach12g01555 1420 SMART mt_12 1201 1232 IPR003690 GO:0003690|GO:0006355
Bach12g01555 1420 SMART mt_12 1306 1337 IPR003690 GO:0003690|GO:0006355
Bach12g01555 1420 SMART mt_12 1338 1372 IPR003690 GO:0003690|GO:0006355
Bach12g01555 1420 SMART mt_12 1271 1301 IPR003690 GO:0003690|GO:0006355
Bach12g01555 1420 SMART mt_12 1237 1267 IPR003690 GO:0003690|GO:0006355
Bach12g01555 1420 SMART mt_12 1164 1196 IPR003690 GO:0003690|GO:0006355
Bach12g01555 1420 SMART mt_12 1128 1159 IPR003690 GO:0003690|GO:0006355
Bach12g01555 1420 Gene3D Transcription termination factor 3, mitochondrial 1167 1401 IPR038538 -
Bach12g01555 1420 Coils Coil 1031 1072 - -
Bach12g01555 1420 Pfam mTERF 1115 1271 IPR003690 GO:0003690|GO:0006355
Bach12g01555 1420 Pfam mTERF 1281 1390 IPR003690 GO:0003690|GO:0006355
Bach12g01555 1420 SUPERFAMILY DNA/RNA polymerases 738 1035 IPR043502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01555 Bach-Chr12 11056777 11063777 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bach12g01555 RVT_1 1e-40 CL0027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01555 - - cit:127903653 834.713