Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01552 CCAGGTTCCAGTTTCCATATTATATTCTCTCTATTTTGTCAGTCAAAGTTTGCTCAGTGCCTCTGCTCCCTTCAAGCCTTTTGCGTATTGGGTGGTAAAGATTCTAAGCTACCGTTATCTTCTTCACCTTCGAGTCAACGTCTGTTCTTGCCTCTCGTTTCACTGTATTTGAAGCTTCCTGGGTCAACTCTGGCGTATCAGTAAGTCTATTACTCAAATTTTGTGTCTTGATTCATTGTCTCAAGTTGCTTCAGAATACTTAGATTCGTCCTTTTTCTTTCAAGGTGTCCTCCTCCCTTTGCTAGTCTGGTACTAGTTGTAATGACTATTTTGTAGTTATTCCTAAATATATTTGATGGGTCAGAATCAAATGGAGAATCAAAGCCCAAATCTTTGTCTCTGGAGCTCTGAATTTAATTGTTTAGCTTGCATGTGACGTTGCTGGCCCTGGGATTCTGATAATTTGAGCTTGGTTCAGCTATAGAAATTGCTGGTTTTCTTTTCAATTGAGAATTTAAGATGGGTCATTGGTTTTATGCTCTTGGCTGACTTATAAGATTGTTGGGCACGATTGGTGGTTGATATATTTGTGGTCATGGATAATGCAAATGAAGTATCATCATCCTTGAGTTTTGCATCTTCTAACTTATCCAATGGATCTTGTAATAACATGTCTGCTGCTGCTAGCAGTGAGCATGGAACTAACCTTGAACATTTGAGTTTGAGCAAGCTCAGTGGAAGCCTTGAGAAGTTATTGATTGATGCTGGATTTGACTATAGTGATGCTGAGATTGTTGTTGAGGATATTCCTGTTGGGGTTCATCGGTGTATATTGGCATCACGTAGTCAGTTTTTTCATGAACTTTTTAAGAAAGGAAATGATGGTTCGGCGAAGGAAGGTAAGCCAAGGTATCTCATGTCAGAATTGGTGCCTTACGGGGTAGTTGGATATGAAGCCTTCCATGTGTTCTTGCATTATTTGTATACTGGAAAGCTTAAGGCGTCACCACCAGAAGTATCAACATGTGTTGATGAAGCATGTGCCCATGATGCATGCCGCCCTGCCATCAACTATGCTTTGGAACTAATGTATGCATCTACCACTTTTCAAATGAAAGAGCTTGTTTTACCAGTTCAGCGGCGACTCCTCAATTTTGTTGATAAGGTTCTTGTGGAAGATGTCATTCCAATTGTTATTGCTGCCTTCCATTGCCAACTAAATCAGCTTCTCTCTCACTGCACCCAGAGACTAGCAAGGTCTGATCTTGATAACATAACTTTGGAGAGAGAGCTCCCTCATGAAGTTGTGAGTGAAATCAAATCACTCCGAGTGAAACCTCTTCCAGAATTGACACCCAATGCTATGGAAGTGGAACCCAATGAAAAGAATGTCAGAAGAATCCTTAAGGCATTGGACTCTGACGATGTTGAGTTGGTGAAGCTTCTTTTGGATGAATCTAATGTCACTCTAGATGACGCTTATGCCCTCCACTATGCCTGTGCCTATTGTGATTCTAAGATTGTTCAAGAGGTTCTTAGTCTGTCCTTGGCTGATATCAACTGTAGGAATTCCCGAGGATATATGGTTCTTCATGTGGCTGCAAGACGGAAAGTTCCATCAATTTTAGTTGCACTGCTTAAAAGGGGTGCAGATGCATCAGAAACCACATTGGATGGACAAACTGCCGTTGCAATTTGTCGGAGGTTGACAAGACCAAAAGATTTTAATGAAAAAACAGAGCAGGGGAAGGAATCAAACAATGATCGGCTCTGCATTGATATCCTGGAGAGAGAGATGAGAAGAAATTCAACGTCTGTGAACATACCGGACTCATCACAGTTAATTGCTGATGATCTGCACATGAGATTGGATTACCTGGAAAATAGAGTTGCATTCGCTAGGCTGTTGTTTCCTGCTGAGGCTAGGGTAGCCATGGAGAATGCAGAGCTAGGTTCAAGCGGCAACCTAAGAGAGGTTGATCTAAATATAACTCCTGCACTGCGAACCAGAAGACTTCAGTCAAGGTTGAATGCCCTCCTAAAAACAGTTGAGAATGGTCGACGCTTCTTTCCCCATTGCTCAGAGGTGATTGATAAGTTTCTAGAAGATGATATATCTGATGTTTTATTCCTAGAGAAGGGCTCAGAAGATGAGCAGAGAATCAAGAAAGCACGCTTCATGGAAGTTAAAGAAGATGTGCAAAAGGCATTTCGAAAGGACATGGCTGGAAATAACCATCCAGGGTTGGCATCCACTGTTTGCTCCTCATCGTCCTCATCTCCAAGAGAAGGTCTAAGACACAGAACTAGGAAAAGGTAAAGTTCATGCTTTCCAAGAGGGAGAGCGAAGGGGGGTGATAGAGTTTTGGATCTCCTGCAATAGTACAAGCATAGCAAAGCAAATGTTATATGGCTATCTTTTCTGCCAGTAAGATGCTAAATTTTATGATAGGCATTTTGAATTGATTGCTCTTCAATATAGTTTACTTGTGGGGTACGAATCCTCTAAATTTGTGGCAGGAACTGCATCGTGTAGTCAACCCAAATATACTTTTGGATTAAAATCCAGAAGTTTAAAAAGAAGACTGCAAACAACTGCAGGGACTTAGGAATGCAGAGGATCCATTTCATTACTTGAGATGTATACAATTGGTACAATGTAATTTACACGCTATATTGTAGCTGTCTAAGATCTAATTGAGTACAATTTGC 2712 0.41 MDNANEVSSSLSFASSNLSNGSCNNMSAAASSEHGTNLEHLSLSKLSGSLEKLLIDAGFDYSDAEIVVEDIPVGVHRCILASRSQFFHELFKKGNDGSAKEGKPRYLMSELVPYGVVGYEAFHVFLHYLYTGKLKASPPEVSTCVDEACAHDACRPAINYALELMYASTTFQMKELVLPVQRRLLNFVDKVLVEDVIPIVIAAFHCQLNQLLSHCTQRLARSDLDNITLERELPHEVVSEIKSLRVKPLPELTPNAMEVEPNEKNVRRILKALDSDDVELVKLLLDESNVTLDDAYALHYACAYCDSKIVQEVLSLSLADINCRNSRGYMVLHVAARRKVPSILVALLKRGADASETTLDGQTAVAICRRLTRPKDFNEKTEQGKESNNDRLCIDILEREMRRNSTSVNIPDSSQLIADDLHMRLDYLENRVAFARLLFPAEARVAMENAELGSSGNLREVDLNITPALRTRRLQSRLNALLKTVENGRRFFPHCSEVIDKFLEDDISDVLFLEKGSEDEQRIKKARFMEVKEDVQKAFRKDMAGNNHPGLASTVCSSSSSSPREGLRHRTRKR 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01552 574 SUPERFAMILY POZ domain 60 186 IPR011333 -
Bach12g01552 574 Gene3D Potassium Channel Kv1.1; Chain A 26 220 IPR011333 -
Bach12g01552 574 ProSiteProfiles Ankyrin repeat profile. 327 359 IPR002110 GO:0005515
Bach12g01552 574 CDD BTB_POZ_NPR_plant 51 188 - -
Bach12g01552 574 Gene3D - 262 401 IPR036770 -
Bach12g01552 574 SMART ANK_2a 327 356 IPR002110 GO:0005515
Bach12g01552 574 SMART ANK_2a 293 323 IPR002110 GO:0005515
Bach12g01552 574 SMART ANK_2a 264 292 IPR002110 GO:0005515
Bach12g01552 574 FunFam regulatory protein NPR3-like 261 401 - -
Bach12g01552 574 FunFam Regulatory protein NPR3 36 220 - -
Bach12g01552 574 ProSiteProfiles BTB domain profile. 62 138 IPR000210 GO:0005515
Bach12g01552 574 SMART BTB_4 62 188 IPR000210 GO:0005515
Bach12g01552 574 Pfam BTB/POZ domain 60 142 IPR000210 GO:0005515
Bach12g01552 574 SUPERFAMILY Ankyrin repeat 266 370 IPR036770 -
Bach12g01552 574 MobiDBLite consensus disorder prediction 541 574 - -
Bach12g01552 574 Pfam Domain of unknown function (DUF3420) 223 270 IPR024228 -
Bach12g01552 574 MobiDBLite consensus disorder prediction 550 564 - -
Bach12g01552 574 Pfam Ankyrin repeats (3 copies) 275 355 IPR002110 GO:0005515
Bach12g01552 574 Pfam NPR1/NIM1 like defence protein C terminal 369 557 IPR021094 -
Bach12g01552 574 PANTHER REGULATORY PROTEIN NPR3 18 567 IPR044292 GO:0009862|GO:2000022|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01552 Bach-Chr12 11046843 11052104 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bach12g01552 NPR1_like_C 6.5e-74 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01552 K14508 - gmx:100816582 816.994