Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01481 ATGGCTTTCATATTCGAACCTCCTAGCGACGAAGAGCTTGAATACTCTGAAGCAGAAGACAAAGGGCAGGAAGAAAGTTCAGAAGACGAACAACAAGAACAAAGCGGCGAAGACGATGAAGAAGAAGAAGAAGAAAGAGCAGCACCAAAATCAAAGAAGAAGAAAACTCAATCGCCGTGGGACTTTGCTAAGTACACTGAATCAGTCGCAGAGGAACATGCCCGCCGAAGCACAACCTCGATTGATTACAAAATCTCCAAAGCTCTGAAAGAACGTTCTGCCCCACTTGAACAAACCACAGCGGATGACATTGATAGCTCAGAGTCCGAACCCGACAAACAAGAAGATTATAGACCAGAAGATGAAGATGATGGAGATGGTGATGTTGGTGAGAGCAAATCTTTCTTTGCCCCTTCTGATGGAGTCTCCTTCCATGCTGATTCGTTCATGAAGCTTAACTTGTCACGTCCTTTGCTACGGGCTTGTGAGGCATTAGGATACAGTAAACCAACACCCATCCAGGCAGCTTGTATACCATTGGCATTAAATGGTCGTGATATATGTGGAAGTGCCATTACTGGGTCTGGGAAGACTGCTGCATTTGCCCTGCCTACTTTAGAGAGGTTATTGTTCCGTCCAAAACGCATGCAGGCCATCAGGGTTCTCATTCTCACTCCAACCAGAGAATTGGCAGTCCAAGTTCACAGTATGATAGAGAAGCTTTCACAGTTTACTGATATAAGGTGTTGCCTGGTTGTTGGGGGTTTATCGACAAAGGTGCAAGAGGCAGCATTGAGATCTATGCCAGATATTGTTGTGGCCACTCCAGGGCGCATGATAGATCATTTGCGCAATTCTCTGTCAGTGGATTTGGATGATCTTGCTGTTCTAATCCTTGATGAGGCTGATCGACTTTTAGAGCTTGGATTTAGTACTGAAATTCATGAACTTGTTCGTCTGTGTCCCAAAAGAAGGCAGACCATGCTATTTTCAGCTACAATGACTGAAGAGGTTGATGAACTTGTTAAACTTTCTTTGACAAAGCCTGTGCGTCTATCTGCTGACCCATCTACAAAACGGCCTGCAACCTTAACTGAGGAAGTGGTTAGAATACGAAGAATGCGTGAAGTAAATCAAGAAGCTGTTCTTCTTGCTTTGTGCTCCAAGACTTTTACGTCTAAAGTGATCATCTTCAGTGGAACAAAGCAAGCTGCACATAGGTTGAAGATTATATTTGGATTAGCTGGCTTGAAGGCAGCTGAGCTTCATGGAAATCTTACTCAGGCCCAGCGTCTAGAAGCTTTGGAACAGTTTAGGCAGCAGCAAGTTGATTTTTTGATTGCAACTGATGTGGCTGCTCGTGGCCTTGACATTATTGGTGTTCAAACAGTTATCAACTTTGCATGTCCACGGGAACTCACCAGTTATATTCATCGAGTGGGTCGCACTGCAAGAGCTGGTAGGGAAGGATATGCTGTCACATTTGTGACTGATAATGACAGATCACTTTTAAAAGCCATTGCTAAGAGGGCTGGTTCAAAGCTGAGGAGCCGCATTGTTGCAGAGCAATCTATAATTAAGTGGTCCAGTATAATTGAGCAAATGGAGGATCAAATTTCTGCAATTCTTCAAGAAGAGAGGGAAGAAATGGCCCTAAGAAAAGCTGAAATGGAGGCGACAAAGGCAGAAAACATGATTGCACACAAGGAAGAGATTTATTCCCGCCCCAAAAGAACCTGGTTTCAAACAGAGAAGGAGAAGAAGCTTGCAGCGAAAGCAGCAAAGGAATCTATGGACAAGACAAGGACTTCTGGGAAGGAGTTAATTAGTGCACAAGAAGCTGAAGACCTAAAAATGAAGGAAAAGAGGAAGCGGGAACGAGAAAAAAATATGCCCAGGAAGAAGCGTAGAAAACTGGAAGCAGCTAGAGAGATGCTGGAGGATGAAGGGCTCACAGGCAAGGTAGAGGCTAATGGGAAAAATAAGAAAGAAAATGCTGGAATGTCACTTGTTGATCTAGCATACCGACGAGCAAAAGCAGCAAAGGCTGTGAAGAAGGCAGCAGATGCTGGCAAGATTTTGAAGAAGGGCAAAAGTAAAACCAAACATTCTCCCCGTGAGACTCCTTCAAGGACAAAGGAGATGCAGGATCTATTCCAGAATGACATGAGTGAGAAGAAGGCAAAAAGAAAAGGTTTTGGGGCAGGAAAGAAGTCCAAGAGTTCATTTAAAAGCAAGTCAAGGTACAAGCGCAGGTAGTCTGTCAGACCAATAATCCTGCCATATGCCATCCAAATGAAAAGTCAGAATTTTGATCACACCTAATATGCTGTTACTATCAAGTGACAGAAATGCTCCCACAACATGAAATAGTTTTCAGTAGTTATATGTATCATTTAACAAAGTGGCTTCCTCCCCATTACTAAAAATGGGTGCCTTATTTGTTGTTAAATTTAAGCTTGATTATAATTTCA 2474 0.4321 MAFIFEPPSDEELEYSEAEDKGQEESSEDEQQEQSGEDDEEEEEERAAPKSKKKKTQSPWDFAKYTESVAEEHARRSTTSIDYKISKALKERSAPLEQTTADDIDSSESEPDKQEDYRPEDEDDGDGDVGESKSFFAPSDGVSFHADSFMKLNLSRPLLRACEALGYSKPTPIQAACIPLALNGRDICGSAITGSGKTAAFALPTLERLLFRPKRMQAIRVLILTPTRELAVQVHSMIEKLSQFTDIRCCLVVGGLSTKVQEAALRSMPDIVVATPGRMIDHLRNSLSVDLDDLAVLILDEADRLLELGFSTEIHELVRLCPKRRQTMLFSATMTEEVDELVKLSLTKPVRLSADPSTKRPATLTEEVVRIRRMREVNQEAVLLALCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRQQQVDFLIATDVAARGLDIIGVQTVINFACPRELTSYIHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLRSRIVAEQSIIKWSSIIEQMEDQISAILQEEREEMALRKAEMEATKAENMIAHKEEIYSRPKRTWFQTEKEKKLAAKAAKESMDKTRTSGKELISAQEAEDLKMKEKRKREREKNMPRKKRRKLEAAREMLEDEGLTGKVEANGKNKKENAGMSLVDLAYRRAKAAKAVKKAADAGKILKKGKSKTKHSPRETPSRTKEMQDLFQNDMSEKKAKRKGFGAGKKSKSSFKSKSRYKRR 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01481 752 CDD SF2_C_DEAD 364 496 - -
Bach12g01481 752 MobiDBLite consensus disorder prediction 609 626 - -
Bach12g01481 752 MobiDBLite consensus disorder prediction 92 134 - -
Bach12g01481 752 SMART ultradead3 166 367 IPR014001 -
Bach12g01481 752 MobiDBLite consensus disorder prediction 731 752 - -
Bach12g01481 752 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 147 175 IPR014014 GO:0003724
Bach12g01481 752 MobiDBLite consensus disorder prediction 633 661 - -
Bach12g01481 752 MobiDBLite consensus disorder prediction 1 62 - -
Bach12g01481 752 Coils Coil 611 631 - -
Bach12g01481 752 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 113 705 - -
Bach12g01481 752 SMART helicmild6 402 487 IPR001650 -
Bach12g01481 752 Gene3D - 354 521 IPR027417 -
Bach12g01481 752 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 178 352 IPR014001 -
Bach12g01481 752 MobiDBLite consensus disorder prediction 103 128 - -
Bach12g01481 752 Pfam Helicase conserved C-terminal domain 383 487 IPR001650 -
Bach12g01481 752 MobiDBLite consensus disorder prediction 683 752 - -
Bach12g01481 752 MobiDBLite consensus disorder prediction 10 44 - -
Bach12g01481 752 Coils Coil 540 572 - -
Bach12g01481 752 MobiDBLite consensus disorder prediction 593 667 - -
Bach12g01481 752 MobiDBLite consensus disorder prediction 703 730 - -
Bach12g01481 752 Gene3D - 120 353 IPR027417 -
Bach12g01481 752 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 298 306 IPR000629 -
Bach12g01481 752 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 382 526 IPR001650 -
Bach12g01481 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 507 IPR027417 -
Bach12g01481 752 CDD DEADc_DDX27 158 353 - -
Bach12g01481 752 Pfam DEAD/DEAH box helicase 171 341 IPR011545 GO:0003676|GO:0005524
Bach12g01481 752 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01481 Bach-Chr12 10481067 10488780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01481 103 504 Eukaryotic Initiation Factors Gene Family AT3G13920 33.744 1.33e-54 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01481 K13181 - qsa:O6P43_021132 1048.11