Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01460 ATGAAGCAAAGTGATACCAGAGAGAAGACCATCACTTGCAAAGCTGCGGTGGCATATGGTTCCGGAGAGCCATTGGTGGTGGAGCAAGTTCAAGTTCATCCTCCTCAGAAATTGGAGGTTAGAATCAAGATTCTCTTCACTTCAATCTGTCATAGCGATCTCGGTGCTTGGCAAGGCCAGAACGAGGCTCAACGTGTTTATCCTCGAATTTTTGGCCATGAAGCTTCTGGAATTGTGGAGAGCGTGGGAGAAGGCGTAGAGGAGCTGAAAGAAGGAGACTACGTGGTGGCCATATTCAATGGAGAGTGTGGTGAATGCGGCTACTGCAAGCGCGAGGGGACAAACAAGTGCGAGAGGTACGAGGTTAATCCGATGAAGAAGGTCATGGTTAGCGACGGAAAAAGCAGATTCGCCACCGCCGACGGCAAACCCATATACCATTTCCTCAATACCTCGACTTTCAGTGAGTACACAGTTTTGGATTCTGCCTGCGTCGTCAAGCTTCCCTTTCCCTCTCCCTCCGACGTTGACCTCAAAAAGCTCACCTTGCTCAGTTGCGGTGTCTCCACCGGTGTTGGAGCAGCATGGAATACTGCCAATGTGCATTCTGGTTCAACCGTAGCTGTCTTTGGTTTAGGCTCTGTGGGGCTCGCTGTTGCAGAAGGGGCACGAGCCAGAGGGGCATCCAAAATAATAGGCGTGGATATTAACCCTGACAAATTTATCAAAGGGCGAGCACTGGGAATCACAGACTTCATTAATCCAAGAGATGAGGAGAAAGCTGTATACGAGAGAATCATGGAAATGACAGAAGGAGGCGTAGATTATAGCTTTGAATGTGCTGGAAACGTTGACGTTCTCCGTGATGCCTTCTTGTCTGCACATGAGGGTTGGGGATTAACGATTGTATTGGGAGTTCATTCAACACCAAGAATGCTTCCCATCCATCCAATGGAGTTGTTTCAAGGTCGTAGAATAGTGGGATCAGTGTTTGGAAACTTCAAAGGGAAATCCCAGCTGCCTCACTTTGCTAAAGAATGCATGAATGGGGCAGTGAAGCTGGACGAATTCATCACTCACGAGCTTCCCTTCGACCAGATAAACGAAGCCTTTCAACTTCTGATAGCTGGAAAGTCACTCAGATGTCTCCTACACTTCTAG 1161 0.4832 MKQSDTREKTITCKAAVAYGSGEPLVVEQVQVHPPQKLEVRIKILFTSICHSDLGAWQGQNEAQRVYPRIFGHEASGIVESVGEGVEELKEGDYVVAIFNGECGECGYCKREGTNKCERYEVNPMKKVMVSDGKSRFATADGKPIYHFLNTSTFSEYTVLDSACVVKLPFPSPSDVDLKKLTLLSCGVSTGVGAAWNTANVHSGSTVAVFGLGSVGLAVAEGARARGASKIIGVDINPDKFIKGRALGITDFINPRDEEKAVYERIMEMTEGGVDYSFECAGNVDVLRDAFLSAHEGWGLTIVLGVHSTPRMLPIHPMELFQGRRIVGSVFGNFKGKSQLPHFAKECMNGAVKLDEFITHELPFDQINEAFQLLIAGKSLRCLLHF 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01460 386 Gene3D - 16 381 - -
Bach12g01460 386 SUPERFAMILY GroES-like 6 196 IPR011032 -
Bach12g01460 386 FunFam Alcohol dehydrogenase 6 16 203 - -
Bach12g01460 386 Gene3D - 191 329 - -
Bach12g01460 386 SUPERFAMILY GroES-like 335 386 IPR011032 -
Bach12g01460 386 PANTHER ALCOHOL DEHYDROGENASE 9 383 - -
Bach12g01460 386 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Bach12g01460 386 SMART PKS_ER_names_mod 20 380 IPR020843 GO:0016491
Bach12g01460 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 176 350 IPR036291 -
Bach12g01460 386 Pfam Zinc-binding dehydrogenase 215 333 IPR013149 -
Bach12g01460 386 FunFam S-(hydroxymethyl)glutathione dehydrogenase 191 329 - -
Bach12g01460 386 Pfam Alcohol dehydrogenase GroES-like domain 39 139 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01460 Bach-Chr12 10346289 10350033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01460 39 375 Monolignol Biosynthesis Gene Families AT2G21890 28.152 1.12e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01460 K00001 - gmx:100787307 618.616