Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01427 ATGGGAAGGGGCAGAGGAGCCGCGGTTGTTAAACCGGTAGCGGCTGCAGCTGCAGCGGCTGTTGAGCTTAATGGATCCGGGTCGAGGACCGTTTTAAAAGAGCCGAAGTACCGGGGCGTGAGGAAGAGACCGTGGGGAAGATTCGCCGCCGAGATCAGGGACCCGTTGAAGAAAGCTCGGCTCTGGCTAGGCACCTTTGACTCAGCCGAAGAAGCTGCTCGAGCCTATGACGCCGCAGCTCGGACCCTCCGTGGACCCAAAGCAAAAACTAATTTCCCTCCATCCACTTCTCTCTCTCCTTTCCGTTTCCACAACAACCAGAACGATCCCCTTTTAGATCACCGGTTGTACGCCGCTAATGGTGGCTACCAAGAGCAGCAGATTAATCCCCAGAGACCCACCTCCAGCGGCATGAGCAGTACTGTTGAGTCATTCAGTGGACCATGCCCTCCGTCAACTACTGCTAGACCTCCGTCGGCGACCGTGACGGCTACCATAGCAACCACAAGGAGATACCCTCGTACGCCGCCAGTTGTGCCTGAGGATTGCCATAGTGACTGTGATTCGTCGTCATCGGTTGTTGAGGACAACGGCGATATAGCTTCGTCGTCGTTTCGTCAACCGTTGCCGTTCGATCTTAATTTCCCACCGTTGGATGGTGTTGACTTGGCCGGTGATGATCAACACTGCACCGCACTCTGCCTTTGA 708 0.5565 MGRGRGAAVVKPVAAAAAAAVELNGSGSRTVLKEPKYRGVRKRPWGRFAAEIRDPLKKARLWLGTFDSAEEAARAYDAAARTLRGPKAKTNFPPSTSLSPFRFHNNQNDPLLDHRLYAANGGYQEQQINPQRPTSSGMSSTVESFSGPCPPSTTARPPSATVTATIATTRRYPRTPPVVPEDCHSDCDSSSSVVEDNGDIASSSFRQPLPFDLNFPPLDGVDLAGDDQHCTALCL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01427 235 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 30 200 - -
Bach12g01427 235 Pfam AP2 domain 35 85 IPR001471 GO:0003700|GO:0006355
Bach12g01427 235 CDD AP2 35 95 IPR001471 GO:0003700|GO:0006355
Bach12g01427 235 Gene3D AP2/ERF domain 36 94 IPR036955 GO:0003700|GO:0006355
Bach12g01427 235 SUPERFAMILY DNA-binding domain 36 95 IPR016177 GO:0003677
Bach12g01427 235 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Bach12g01427 235 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Bach12g01427 235 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Bach12g01427 235 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
Bach12g01427 235 MobiDBLite consensus disorder prediction 126 170 - -
Bach12g01427 235 FunFam Ethylene-responsive transcription factor 2 36 94 - -
Bach12g01427 235 MobiDBLite consensus disorder prediction 126 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01427 Bach-Chr12 10101045 10101752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01427 1 235 AP2-EREBP Transcription Factor Family AT3G20310 59.375 4.70e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach12g01427 AP2 2.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01427 K09286 - pvy:116145234 265.003