Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01412 ATGGATGCTACGCCGAGCTCTGAGTTGACGGAACCAGGGGTGGACATGCAGCTGGATGGCTCGCCGGCTTCCGAGGAATTGGGTGACCGGTCCAGTAAGAAGGCAAAGGTGGGGGACAGTGGGGGATTGAAGAGAGTGGCGGAGATTGTGATGGTTTTGTCAACAATGGCGGCAATGAGGGGTGGGAGGAAGCCGACTGATGTGGAGAATGAGCTGATGATGGAGGCTCGGGCTAAGTTAGCGGATTTGTGCCAAGAGTTGGCTCCAAAGGATATTGTGGCCAGGGAAGCTATCGGGACTGCGATTGAGGACCTGGGGTTGAATGGGAAGATTAAAGACCAGAGGTTAGGGTTTAGAACTCCCAAGATGTCGATAGCTGAGAGATTTTCGCACGCCAAGCGGAAGATGGAAGAAACAAAGAAATTTTCTGCACATTCTGCAACATATACACCTCAGCCATTGCAAACAAGCACTGGTGGAACAGTTGAAAACCGTGTGCCATCCCATGCTGTTCGAATGTTGCCATCAGATAAATCAAGCCATGCAGCAATCTCTTCAGCATCTACTCTAGCTTCTACCCCTGTGCCTCAGGTTTCTACAGCTTTACACCATCTATCATCTAGCAATGAAGTGAGACCACCTATGGTTACTAGTGGAATGTCAAGCAGCCACTGGGGAAGAAATTCATCTTCGTTGGCATTGCCAAAAGTTGAACAACCACAGTTCAAAGTTGATGGAGGATCAAATGGTTCTTCTTATGTGTTACAAGTTCAAGCAAATTCTTCTGCAAACCAACCTAATGCTCCAACGTGGTCAATACAGACCCAATCAGCCTCATCAACAAGAAGTGGACCTGAAAATAAGGTGCCTGGTCATACTTCTGTCAAGGTTGATGGGATGGGTGACCATACTCTGTCATGGGCAGCTCCACAACCAGCTAGAGATCAGAGCTTTAGACCATTTATTACCCAAACAACACCCGGGAATTTGTCAAGTGTGCAGCAGCCATTGCAGGGGACGAATATTGTCCAACCTCCTTTGTTTACTAATAATCACCTTGAAATTGCAAAGATTGTCCAGAAATTTTTACAACCTAAGCTTCCTGAGCATCTCACATGGACTCCTCCATCAAGAGATTATATGAGTAAGGCTACAACTTGCCTAATGTGTAATCTTACTGTCAATGAGGTAGATACTGTCCTTCTTTGTGATGCTTGTGAGAAAGGATTTCACTTGAAGTGCCTGCAGTCATCAGTCTTGAGAGGAATTCCTAGGGGTGAGTGGCACTGTATGAGGTGCTTGACTTTAAGCAACGGAAAGGCTTTGCCTCCAAAATATGGTCGCGTAATGAGATCATCAAACACGCCAAATGCACAACCAAAAGTGCTCTCCAGCACAGCTGGAATTCAACCTTCTTTAGAGAAGAAAGCAGGAGTGTTAGACACAAAGATTTACCGGCAGAAGCTGACTACAAATGGGAGCTCTGCTCCAACTAAAGCCCTTGGCAGCAGCTCTGCTGAGCTGCCATCTGACTCAAAGACCCTAGAGACAAGAGAAATGCAAGGGGACACCATAACATCCAGCACAAAAAATATGGATGAGAAGCCTGACCCAAGTATATCAAACAAATCCCTTGATGCAGCTTCTAATTCTTCTGTTGGCTTGCTGGATGAAATTTCTGCTCAAAGAATAAAAAATTCTGAGGCATCTACCTGTAAAGAGGGAGAAATTGCTTCAGAAACAGAGACTCTTCCTAAATTATCACAGCAGAATCTACAAGTTGAGCAGACGGTGTTGCAAGACAGTGCTGAAGGATCATTAGATAAGCACGTTGATAATAGTTTGATGTATAATAACCAAAAGGAATCTCTAGCAGAAGGTCTGAGATACGATATCCAAAGAGATGACAAAGATGTTGCTCTTGGTAACTCTGATGGAAGTTCTGGAACTAATACTGATGGTAGACAGCGCTCTCAATTACCTTCAAGTAGGTCACATGTTGTAGAATGGACTGGTGATGTTATACAACACGTGAATGAGAAAAAGTTTTACCAATCTTGCTGTGTTGATGGAGTAACATATAGACTGCAGGATCATGCTCTTTTTATTTCTAACCTTGGAAAATTAGAACCTTCTAAACTTCAGTCTATGTGGGAAGATAGCAAAACTGGGTTAAAGTTGGTTAATGCGACAAGATGCTACTTTCCTGGTGATTTGCCTGGGAATATTGCCCATCCATGTATTTCTGAAGTTAATGAGGTGTATGAATCTAATGGTGATAGAACTGAAATGGCTGCCTCCATTCAAGGCCTGTGTGAAGTCCTCCCTTCTGATAAATTTAAACAAGAAACTGATAGACGAAATCAGTCAGGACTTGAGGCAAGTGCTACACGACAGCCAATTTTCCTTTGCAGATGGTTCTACGATGAAGTCAAAAAGTTATTTCAACCTGTTATCAGTTAATGCTGTCTTGAACATATGTGGTCCTCCTGAATATGACAACTCCAT 2508 0.4386 MDATPSSELTEPGVDMQLDGSPASEELGDRSSKKAKVGDSGGLKRVAEIVMVLSTMAAMRGGRKPTDVENELMMEARAKLADLCQELAPKDIVAREAIGTAIEDLGLNGKIKDQRLGFRTPKMSIAERFSHAKRKMEETKKFSAHSATYTPQPLQTSTGGTVENRVPSHAVRMLPSDKSSHAAISSASTLASTPVPQVSTALHHLSSSNEVRPPMVTSGMSSSHWGRNSSSLALPKVEQPQFKVDGGSNGSSYVLQVQANSSANQPNAPTWSIQTQSASSTRSGPENKVPGHTSVKVDGMGDHTLSWAAPQPARDQSFRPFITQTTPGNLSSVQQPLQGTNIVQPPLFTNNHLEIAKIVQKFLQPKLPEHLTWTPPSRDYMSKATTCLMCNLTVNEVDTVLLCDACEKGFHLKCLQSSVLRGIPRGEWHCMRCLTLSNGKALPPKYGRVMRSSNTPNAQPKVLSSTAGIQPSLEKKAGVLDTKIYRQKLTTNGSSAPTKALGSSSAELPSDSKTLETREMQGDTITSSTKNMDEKPDPSISNKSLDAASNSSVGLLDEISAQRIKNSEASTCKEGEIASETETLPKLSQQNLQVEQTVLQDSAEGSLDKHVDNSLMYNNQKESLAEGLRYDIQRDDKDVALGNSDGSSGTNTDGRQRSQLPSSRSHVVEWTGDVIQHVNEKKFYQSCCVDGVTYRLQDHALFISNLGKLEPSKLQSMWEDSKTGLKLVNATRCYFPGDLPGNIAHPCISEVNEVYESNGDRTEMAASIQGLCEVLPSDKFKQETDRRNQSGLEASATRQPIFLCRWFYDEVKKLFQPVIS 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01412 820 CDD BAH 691 818 - -
Bach12g01412 820 ProSitePatterns Zinc finger PHD-type signature. 387 433 IPR019786 -
Bach12g01412 820 SMART PHD_3 386 434 IPR001965 -
Bach12g01412 820 Pfam PHD-finger 387 434 IPR019787 -
Bach12g01412 820 MobiDBLite consensus disorder prediction 1 39 - -
Bach12g01412 820 MobiDBLite consensus disorder prediction 567 586 - -
Bach12g01412 820 MobiDBLite consensus disorder prediction 491 549 - -
Bach12g01412 820 MobiDBLite consensus disorder prediction 519 535 - -
Bach12g01412 820 ProSiteProfiles Zinc finger PHD-type profile. 384 436 IPR019787 -
Bach12g01412 820 ProSiteProfiles BAH domain profile. 692 819 IPR001025 GO:0003682
Bach12g01412 820 SUPERFAMILY FYVE/PHD zinc finger 378 441 IPR011011 -
Bach12g01412 820 Gene3D - 662 820 IPR043151 -
Bach12g01412 820 MobiDBLite consensus disorder prediction 261 288 - -
Bach12g01412 820 MobiDBLite consensus disorder prediction 643 665 - -
Bach12g01412 820 MobiDBLite consensus disorder prediction 204 230 - -
Bach12g01412 820 MobiDBLite consensus disorder prediction 140 162 - -
Bach12g01412 820 MobiDBLite consensus disorder prediction 143 162 - -
Bach12g01412 820 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 22 818 - -
Bach12g01412 820 MobiDBLite consensus disorder prediction 491 511 - -
Bach12g01412 820 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 349 442 IPR013083 -
Bach12g01412 820 MobiDBLite consensus disorder prediction 638 665 - -
Bach12g01412 820 MobiDBLite consensus disorder prediction 261 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01412 Bach-Chr12 9996614 10001094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01412 386 434 C2H2 Transcription Factor Family AT3G01460 38.776 8.98e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach12g01412 PHD 1.3e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01412 - - gmx:100807139 1011.91