Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01396 ATGGGTATTTCTCGTGATTCCATGCATAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTACGAGCTTGGTAGGCAATCAGCCAACACAAAGCTGTCAAGCAACAAAACTGTTAGGAGGCTTAGGGTTCGAGGTGGAAATGTTAAGTGGCGTGCTTTGAGGCTTGATACTGGAAATTACTCGTGGGGAAGTGAAGCTGTGACTAGGAAAACAAGACTTCTTGATGTGGTGTACAATGCCTCTAACAATGAGCTGGTTCGTACTCAGACATTGGTCAAGAGTGCTATTGTGCAGGTGGACGCAGCACCCTTCAAGCAGTGGTATCTCCAGCATTATGGTGTTGACATTGGTCGCAAGAAGAAGAGTGCAACTTCTGCCAAGAAGGAAGGCGAGGATGGTGAAACTGCAGCTGAGGAAGTGAAAAAGAGCAACCATGTCTTGAGAAAGATAGAGAAACGGCAACAAAACCGAAAGCTTGACCCTCATATTGAGGAACAATTTGGAGGTGGTCGTTTATTGGCTTGTATCTCATCTCGACCGGGTCAATGTGGCCGTGCTGATGGTTATATATTGGAGGGCAAAGAGCTTGAATTCTACGTGAAGAAGATTCAGAGGAAGAAGGGCAAGGGAGCTGCTGCCTAAGATCTATAGCACTTTACTTATTATATCAGAATTTCTTATTGAAGTCACTGTATTTCTCTGGCTAATCAGATGAGAAATTTTGCCACAAGAGATATACTTTTTTGGGTTGGGTGGGGTGTTTGAATGTTACTTTAGACCTGACCTTTTAATTATTTTACTAATAGTTTCGCCTGTTTTAATGGATTATACACTAGTATTGACTTTATTATCA 871 0.4305 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQSANTKLSSNKTVRRLRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKSATSAKKEGEDGETAAEEVKKSNHVLRKIEKRQQNRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYVKKIQRKKGKGAAA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01396 219 FunFam 40S ribosomal protein S8 162 215 - -
Bach12g01396 219 FunFam 40S ribosomal protein S8 32 161 - -
Bach12g01396 219 NCBIfam ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Bach12g01396 219 MobiDBLite consensus disorder prediction 11 26 - -
Bach12g01396 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
Bach12g01396 219 CDD Ribosomal_S8e_like 5 197 - -
Bach12g01396 219 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Bach12g01396 219 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Bach12g01396 219 Gene3D - 32 161 - -
Bach12g01396 219 Gene3D - 162 215 - -
Bach12g01396 219 MobiDBLite consensus disorder prediction 1 35 - -
Bach12g01396 219 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01396 Bach-Chr12 9896932 9899583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01396 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.010 3.45e-123 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01396 K02995 - qsa:O6P43_013623 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01396 12 9896932 9899583 Bach12g01396 12 9896932 9899583 ECH