Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01387 ATGGAGTCTGCAATCAACTCCGGCGAAAGTAATTTGGCTCCGGAGCTCCGGATGAGGCCTTCCAATGAAACGGCTTCTAATGATCTGAACCAATTTGGGTCAAGGCAGAGCTCTGACGCCAGAGCTACCGGCTCAGCTGGTGGCGGTGCTGCCAGGTACAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCTTGTATCACGATTCCGCCGGGTCTGAGTCCGACGTCGTTTCTCGAGTCTCCGGTGCTTCTTTCTAACATGAAGGTGGAGCCTTCGCCCACTACTGGGTCCCTTGCTAAGCCTTTAACAATACATGGTTCAGTTGTTTCTGCTGCATTTCCTGTAGCGACTGTATGCTTCAATACCAATAGTGTTGATGACGGAAAATCCGGCTTCTTTGCGTTTAAACCACACAGTAGATCAGATATGGTTCCTGCAGATGTCAACAACTGTGCAGATGAACAATCAATGCAAATAGAAGGTCCAGGTCAAGCTCAATCATTTGCATCATCAACATTAGTGAAAAGTGAGATATTGGCGCCCTCAAATGAATTAAGTCTGTCATCACCTGTTAAAATGGTTAGTGCTGTGGGTTGTGCTCCTGTTGAAGTCGATTTGGATGAATCTAACCACAGAAACAACACAGCCACAGGACTTCAAGGATCACAATTTGATGGTAGAGGAAGTGTCCTTTCAGTTGCAGCTGAAAGAGCATCTGATGATGGATATAACTGGCGAAAATATGGACAGAAACATGTTAAAGGAAGTGAATTTCCACGCAGCTATTACAAATGTACACATCCTAACTGTGAAGTCAAGAAACTATTTGAACGCTCACATGATGGTCAAATTACCGAGATAATTTACAAGGGAACACATGATCATCCTAAACCTCAGCCAAGCCGTCGATACTCTGCTGGTGCTATGATGTCTATGCAAGAGGATAGATCTGATAAGGCTTCCTCTTTGGCTGGCCGAGATGACAAAGCATCCAATATCTATGGTCAGGTATCTCAGACTACTGAGCTCAACAGTACTCCAGAGCTATCACCTGTACAGGGAAATGATGATAATCCAGAGGGTGCTGTGTTCGTGTCAACTAGAGGTAATGAGGAGGTTGATGATGATGATCTCTTCTCAAAGCGAAGGAAAATGGACATTGGAACTACTGACATCACTCCTGTTGTTAAGCCTATCCGGGAACCACGGGTTGTTGTACAAACTCTGAGTGAGGTTGATATTTTGGATGATGGGTATCGCTGGCGTAAGTATGGACAGAAGGTGGTGAGAGGCAATCCTAATCCTAGGAGTTATTACAAATGCACAAATGCTGGCTGCCCTGTTAGAAAACATGTGGAGAGGGCATCTCATGATCCCAAAGCAGTAATTACCACATACGAGGGTAAACACAATCACGATGTACCTACTGCCAGAAGTAGTAGTCATGACACAGCAGGACCAGCAGCGGCGGGTGGACAGACAAGAATTAGAACAGAAGAAAGTGACACTATTAGCCTTGACCTCGGGATGGGAATCAGCTCAGCTGCCGAAAATAGATCAAATGGGCAAGGGCAAATGCTTCTCTCTGAATTTGGTGGCAGTCAAACTCACACCAGCAATCCCAATTTTAAGTTTGTTCATACAACCCCAGCTCCGGCATACTTTGGCGTTCTAAGTAATGGCTCAAATCCATATGGTTCGAGAGAAAACTTGACTGATGGTCCATCATTAAACCGTGCCTATCCATGCCCGCAGAATATGGGAAGAGTACTAACGGGTCCATGAAATTGTTTACATTGAACCAAACGAAATAAAATCTGAGTACTGTTTTG 1841 0.4541 MESAINSGESNLAPELRMRPSNETASNDLNQFGSRQSSDARATGSAGGGAARYKLMSPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLAKPLTIHGSVVSAAFPVATVCFNTNSVDDGKSGFFAFKPHSRSDMVPADVNNCADEQSMQIEGPGQAQSFASSTLVKSEILAPSNELSLSSPVKMVSAVGCAPVEVDLDESNHRNNTATGLQGSQFDGRGSVLSVAAERASDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSRRYSAGAMMSMQEDRSDKASSLAGRDDKASNIYGQVSQTTELNSTPELSPVQGNDDNPEGAVFVSTRGNEEVDDDDLFSKRRKMDIGTTDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDTAGPAAAGGQTRIRTEESDTISLDLGMGISSAAENRSNGQGQMLLSEFGGSQTHTSNPNFKFVHTTPAPAYFGVLSNGSNPYGSRENLTDGPSLNRAYPCPQNMGRVLTGP 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01387 597 SUPERFAMILY WRKY DNA-binding domain 239 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g01387 597 MobiDBLite consensus disorder prediction 1 49 - -
Bach12g01387 597 MobiDBLite consensus disorder prediction 20 43 - -
Bach12g01387 597 MobiDBLite consensus disorder prediction 335 356 - -
Bach12g01387 597 ProSiteProfiles WRKY domain profile. 237 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g01387 597 ProSiteProfiles WRKY domain profile. 413 478 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g01387 597 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 150 513 IPR044810 GO:0003700
Bach12g01387 597 MobiDBLite consensus disorder prediction 474 499 - -
Bach12g01387 597 MobiDBLite consensus disorder prediction 293 366 - -
Bach12g01387 597 MobiDBLite consensus disorder prediction 571 597 - -
Bach12g01387 597 FunFam WRKY transcription factor 33 405 471 - -
Bach12g01387 597 Gene3D WRKY domain 403 479 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g01387 597 Gene3D WRKY domain 230 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g01387 597 FunFam WRKY transcription factor 232 302 - -
Bach12g01387 597 Pfam WRKY DNA -binding domain 243 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g01387 597 Pfam WRKY DNA -binding domain 419 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g01387 597 SUPERFAMILY WRKY DNA-binding domain 410 478 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g01387 597 SMART WRKY_cls 242 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g01387 597 SMART WRKY_cls 418 477 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01387 Bach-Chr12 9844586 9849943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01387 56 597 WRKY Transcription Factor Family AT4G26640 56.962 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach12g01387 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01387 - - gmx:547723 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01387 12 9844586 9849943 Bach3g00917 3 19812619 19818403 BWGD
Bach12g01387 12 9844586 9849943 Bach12g01387 12 9844586 9849943 ECH