Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01375 TCCTTCCCCAAAGCACTTAAAAGTCTCATCATATTGTTCCTCCTTCTAAATCATCTTCATGGCCAGCAATGGTGCAAAGGAGCCCTTGATGTCGCTACCACCGGATTCTGAAGCTCAAAATAAGAAAAGGCAGTTAAACAGAAGAAGGTATCTTCGCTGTAGAAGTGCTCCTCTTACAGAACTTGCTCCTCCAGAGAAAAATGGCATTGGCTCAATTCCACGTTCTCAGTCCATTTTTGGCAATTTACATCTAAGTTTTAGAAAAGTGGCTATATACCTTGCAGCATATCTAGGTGTAGGAGCTGTAATCTTCTATCTTGTTAGGGACCAGATCAAGGGGAAGAAAACAGATGGAATTCTTGATGCTGTGTACTTCACAATTGTGACAATGACTACAGTTGGATATGGAGACCTTGTGCCCAATAGTGCCCTTACAAAACTACTTGCCTGTGCTTTCGTCTTCACAGGAATAGCATTGGTTGGACTCATCCTAAGCAAAGCAGCAGACTACATGGTTGAGAAGCAAGAAGTTTTGCTAGTTAAAGCTTTAAACATGCGCAAAAAACTCGGTGAAACTGATATTCTGAAGCAGGTTGAGGTCAACAAAACGAGATACAAACTTATGCTGGTTTCTTTCCTTCTTTTGGCACTCATTATAGCAGGGACAACCATTTTAGTCACTGTTGAGAAGCTAAACTTTGTTGATGCCTTCTATTGTGTTTGTTCCACTCTGACAACACTGGGTTATGGCGATAAAAGTTTCTCAACTCAAGCAGGAAGAATTTTTGCTGTGTTTTGGATATTGACAGGCACCATTTGCTTGGCTCAGCTTTTCCTCTATGCTGCTGAGCTAAAAACTGAGGGCAGACAGAAGGCACTTGTCAAGTGGGTTCTTACTAGGAAGATGACCCATCTAGATTTGGAGGCAGCAGACCTTGATGATGATGGAACTGTTGGGGCTGCTGAATTTGTTATCTATAAGCTGAAAGAAATGGGGAAAGTCAGTCAAGATGATGTGTCACTTATATTGCAGGAGTTTGAAGAGCTTGATGTCGATCAATCTGGCACATTGTCAATTTCTGATATAACACTTGCTCAGTCATTTTAGATACACCAGTATACAGTATAATCATACACTA 1139 0.4109 MASNGAKEPLMSLPPDSEAQNKKRQLNRRRYLRCRSAPLTELAPPEKNGIGSIPRSQSIFGNLHLSFRKVAIYLAAYLGVGAVIFYLVRDQIKGKKTDGILDAVYFTIVTMTTVGYGDLVPNSALTKLLACAFVFTGIALVGLILSKAADYMVEKQEVLLVKALNMRKKLGETDILKQVEVNKTRYKLMLVSFLLLALIIAGTTILVTVEKLNFVDAFYCVCSTLTTLGYGDKSFSTQAGRIFAVFWILTGTICLAQLFLYAAELKTEGRQKALVKWVLTRKMTHLDLEAADLDDDGTVGAAEFVIYKLKEMGKVSQDDVSLILQEFEELDVDQSGTLSISDITLAQSF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01375 349 FunFam Two-pore potassium channel 1 168 276 - -
Bach12g01375 349 SUPERFAMILY Voltage-gated potassium channels 62 168 - -
Bach12g01375 349 MobiDBLite consensus disorder prediction 1 27 - -
Bach12g01375 349 SUPERFAMILY Voltage-gated potassium channels 176 285 - -
Bach12g01375 349 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 71 321 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bach12g01375 349 Gene3D - 170 272 - -
Bach12g01375 349 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Bach12g01375 349 PRINTS Two pore domain K+ channel signature 223 251 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bach12g01375 349 PRINTS Two pore domain K+ channel signature 297 306 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bach12g01375 349 FunFam Calcium-activated outward-rectifying potassium channel 1 64 159 - -
Bach12g01375 349 Gene3D - 64 158 - -
Bach12g01375 349 SUPERFAMILY EF-hand 284 344 IPR011992 -
Bach12g01375 349 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
Bach12g01375 349 Pfam Ion channel 194 262 IPR013099 -
Bach12g01375 349 Pfam Ion channel 73 153 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01375 Bach-Chr12 9698829 9701007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01375 44 348 Ion Channels AT5G55630 61.967 8.59e-142 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01375 K05389 - gmx:100777388 498.434