Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01370 ATGGCGGACTCAGATAACGATTCCGGCGGGGCACAGAACACTGGCAACAACGCTCACGGCAGCGAATCGTCGCCGCGAGAGCAAGACCGGTTTTTGCCTATAGCGAATGTGAGCAGGATCATGAAGAAGGCTCTGCCAGCAAACGCGAAGATCTCAAAGGACGCGAAAGAGACAGTGCAGGAATGCGTTTCCGAGTTCATCAGCTTTATCACAGGTGAGGCCTCCGACAAGTGCCAGAGGGAGAAGCGCAAGACCATCAATGGGGACGATTTGCTCTGGGCTATGACCACCTTGGGATTCGAGGAGTACATGGAGCCTTTGAAGATTTACTTACAAAGGTTTAGGGAAATTGAGGGCGAGAAGAGCGTGGCGGCGCGTGACAGGGAAGGGAGCATCGGTGGCGGCGGTGGTGTCGCTGCAGGGACTAGTGGGTACGAGGGTGGCACTGGTGGAGTATATGGGGGAGGAGGAAGTGGAGTTGAGATGGGGATGATGATGCATCAGGGGCACGTGTACGGCTCAACTGGGTTTCATCCGATGGCTGTGAGTGGTGGTAGTGGTGGTCCCGTTATGGGTAAGAGTGGACCAAGTTATCCTGGTCCTGGATCTAATGCGGGTAGGCCCAGATAA 630 0.5524 MADSDNDSGGAQNTGNNAHGSESSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYMEPLKIYLQRFREIEGEKSVAARDREGSIGGGGGVAAGTSGYEGGTGGVYGGGGSGVEMGMMMHQGHVYGSTGFHPMAVSGGSGGPVMGKSGPSYPGPGSNAGRPR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01370 209 Gene3D Histone, subunit A 18 132 IPR009072 GO:0046982
Bach12g01370 209 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Bach12g01370 209 SUPERFAMILY Histone-fold 28 129 IPR009072 GO:0046982
Bach12g01370 209 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bach12g01370 209 MobiDBLite consensus disorder prediction 1 22 - -
Bach12g01370 209 FunFam Nuclear transcription factor Y subunit B-3 20 139 - -
Bach12g01370 209 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 4 126 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bach12g01370 209 MobiDBLite consensus disorder prediction 182 209 - -
Bach12g01370 209 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Bach12g01370 209 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Bach12g01370 209 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Bach12g01370 209 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01370 Bach-Chr12 9664636 9665265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01370 1 125 CCAAT-HAP3 Transcription Factor Family AT4G14540 83.200 3.90e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach12g01370 CBFD_NFYB_HMF 2.1e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01370 K08065 - qsa:O6P43_013552 293.123