Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01369 ATGGATGAGGGTGAGGGAGGGTACGGTGAGAGCGGGGATCCGACGGATCAGTTCCATCGCAACGAAGCTATATCAGCTGTTGCCGATGAGGGTTTCTTAGGCGAGGAAGACGATGATTATGAGGATCTTTACAACGACGTTAATGTTGGGGAAGGGTTTCTTCAATCGTTGAGGAAGAACGAGGATTTAGGGTTTAGGAATGATGATGTTGAGGAGAAAAAGTCCCAGTCAACTGTTGTGCCTTCGGAAACCGGTGGTGGGGTTTCGATACCAGGTGTCGGTGGTGGTAGTGTTGACGCTGGCGGCGGTGGCGGAGTTGGAGTTGGGGGTATGGATGGTACGTCCAGGGTTTCCGGGAGAGCAGATGGATTTCAGAATCAGGGGTTTAGAGGGAATGAAATGAATGTGAAGGGGAGTGGCGGATCAGGGACCTCTATGGGTGGTGGAGGTGGGATCAGGGTTGAATTAGGACAACCGTCTAGTAAATTGAATGAGATAGAGGAGCAAGGTGCTAATAATAGTGTAGGAGTGCAAGGGATGGGGCAGCAACCTCATGGTGGAGTTGTTGGGAATGTGATCGGAAATGACGCTTTGGTGAGACAAGGCGGAGGAGGAAATCTCAACAGGGTTGGTGGAAATGGGGTTGGGAATAGTGTAACTGGAGTGAATAGTGTTGGTACTGGAGGAGTTGTACCTGTTGCTGGTGCTGGTGCTGGCAGTGCTGGTGGTAATGGTGCTGGGGGAACCATATTATTTGTGGGTGATCTGCACTGGTGGACTACAGATTCTGAGCTGGAGGCAGAGCTTTGTAAGTATGGAACAGTGAAGGAGGTGAAATTTTTTGATGAGAAGGCGAGTGGGAAGTCAAAAGGGTATTGCCAGGTTGAGTTTTATGACCCTACTGCTGCCACTGCATGTAAGGAAGCGATGAATGGACATATGTTTAATGGGAGACCATGTGTTGTTGCTTTTGCTTCTCCTTTTACTGTTAAAAGAATGGGAGAGGCTCAGGTGAGTCGGAATCAACAGATGGCCCAATCTACAGTTACTCAGGGAAGAAGAGCCCCAGCTGATGCTGGGGCTAAGACTGGTGGGAGCAATATTGCTACAGGCGGTAACTACCAAGGTGGAGATGGCAATAGAGGTTTTGGCAGAGGTAACTGGGGGAGAGGGAATGCTCCTGGGATGGGGAATAGAGGGCCTGTTAATCCAATGAGGAACAGGGGTGGTGGCATGGGTGGTAGAGGTATAATGGGAAATGGTGGGAATGGATTTGGACAGGGTCTTGGTGGTACCCCACCTCTTTTGCATCCTCAGTCAATGATGGGTCAGGGTTTTGATCCCGCATTTGGAGGTCATATGGGAAGAATGGGAAACTATGGAGGCTTTCCTGGTGCTCCAACACCTCCATTTTCTGGGATTTTATCTTCATTCCCTCCTGTTGGAGGTGTTGGTTTGCCTGGAGTAGCACCTCATGTTAATCCAGCCTTTTTTGGAAGAGGAATGCCTGTGAATGGCATGGGGATGATGCCAGGATCAGGTGTTGACGGGCCTAATATGGGAATGTGGTCAGATCCAACAATGGGTGGATGGGGTGGTGAGGAACATGGTGGTGGAAGAGCTGGAGAGTCTAGTTACGGAGAGGAAGCTGCATCAGACCATCAGTATGGTGAAGTCAGTCATGATAGAGGTGGTTGGCCTAATGCCCGGGAAAAAGAGAGAGGATCAGAAAGGGACTGGTCTGGTTCTTCTGACAGAAGATACAGGGATGATAGAGATCAAGGATACGAGAGAGATGCTCCTAGAGAAAAAGATATGGCCCATGATCACGAATGGTCAGAAAGAAGACAACGTGATGATAGAGAAATAGGCCGAGAACGGGAAAGGGACCGTGATCGGGAACGGTCTCGAGATCGCGATCGTGACCGTGAAAAGTCCCGTGATCGAGACCGTGAGCGTGACAGGTACAGAGAAGACAGGGACAGATATGCAGATCATCATAGGTATAGAGATCGTGAAGCTGACCATGAAGATGAATGGGAAAGGGGACGGTCATCAAGGACTCACAGCAAGTCACGGTTATCCCAAGAGGAGGAGCATCATTCTAGATCTAGAGATGCTGATTATGGGAAGAGGCGACGGCTTACCTCTGAGTAA 2157 0.497 MDEGEGGYGESGDPTDQFHRNEAISAVADEGFLGEEDDDYEDLYNDVNVGEGFLQSLRKNEDLGFRNDDVEEKKSQSTVVPSETGGGVSIPGVGGGSVDAGGGGGVGVGGMDGTSRVSGRADGFQNQGFRGNEMNVKGSGGSGTSMGGGGGIRVELGQPSSKLNEIEEQGANNSVGVQGMGQQPHGGVVGNVIGNDALVRQGGGGNLNRVGGNGVGNSVTGVNSVGTGGVVPVAGAGAGSAGGNGAGGTILFVGDLHWWTTDSELEAELCKYGTVKEVKFFDEKASGKSKGYCQVEFYDPTAATACKEAMNGHMFNGRPCVVAFASPFTVKRMGEAQVSRNQQMAQSTVTQGRRAPADAGAKTGGSNIATGGNYQGGDGNRGFGRGNWGRGNAPGMGNRGPVNPMRNRGGGMGGRGIMGNGGNGFGQGLGGTPPLLHPQSMMGQGFDPAFGGHMGRMGNYGGFPGAPTPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPGSGVDGPNMGMWSDPTMGGWGGEEHGGGRAGESSYGEEAASDHQYGEVSHDRGGWPNAREKERGSERDWSGSSDRRYRDDRDQGYERDAPREKDMAHDHEWSERRQRDDREIGRERERDRDRERSRDRDRDREKSRDRDRERDRYREDRDRYADHHRYRDREADHEDEWERGRSSRTHSKSRLSQEEEHHSRSRDADYGKRRRLTSE 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01369 718 SUPERFAMILY RNA-binding domain, RBD 245 337 IPR035979 GO:0003676
Bach12g01369 718 CDD RRM_CFIm68_CFIm59 251 324 - -
Bach12g01369 718 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 251 320 IPR000504 GO:0003723
Bach12g01369 718 MobiDBLite consensus disorder prediction 349 378 - -
Bach12g01369 718 MobiDBLite consensus disorder prediction 64 94 - -
Bach12g01369 718 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 20 647 IPR034772 -
Bach12g01369 718 SMART rrm1_1 250 323 IPR000504 GO:0003723
Bach12g01369 718 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 249 327 IPR000504 GO:0003723
Bach12g01369 718 MobiDBLite consensus disorder prediction 554 718 - -
Bach12g01369 718 MobiDBLite consensus disorder prediction 128 142 - -
Bach12g01369 718 MobiDBLite consensus disorder prediction 122 147 - -
Bach12g01369 718 MobiDBLite consensus disorder prediction 1 38 - -
Bach12g01369 718 Gene3D - 238 333 IPR012677 -
Bach12g01369 718 MobiDBLite consensus disorder prediction 517 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01369 Bach-Chr12 9659698 9661854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01369 226 325 Eukaryotic Initiation Factors Gene Family AT4G34110 32.000 4.97e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01369 K14398 - qsa:O6P43_013551 836.254