Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01364 ATGGAGCAAGGAAGATCGTCCAATGTTGATTCAAGAATTACTCAGAATGCAAACCTCTCCCATAACAATGCCGGAAATGCAAGTGAACAGCGACAAGTGCGACAGTCGGTTGCCAATGACTCACACATTCCGACGGCGAATGTGGTGAGGATCATGAGACGAATTCTTCCTGGTCACGCCAAAATCGACGATGACGTGAAGGGGACTTTACAATTGTTGATTTCAGAGTATATCGGCTTCGTCACCAGCGAAGCTAACGACATTTGCAGGAACAACAAACGAAGGATGATAACGGCGGATGATGTCTTGGCAGCGTTTGATCAGCTTGGCTTTGATAATTATGTTGCCATTCTCACTTCGTACCTTAATCAGTACCGTAACCAGACCAAAGGCTCCTCTTCTCAGCGTGGGGAGACTTCGGCGGGAAAGAGGAGCACTGCTGATGGCGGGCTTGCAATTGAGCTGCCACCGGCCCCTTCTGCCCCTAGCTTTGGGCCTGCATTAGAGCTGCCACTGGACCCCAAAGCCCCAAGCTATGGGCCTAAAATTGAGCTACCACCAACCCATGTTGCACCTAACTACGGGCCCTTCTCTGTGGGCCCAAATCCGAGTACTGAGTATTTTCACCCAATGGGCATGGGTGCATTCTATCAAGGTTCAAGAATCCCTCAAAACGCAAACCCATCCCCAAGCAATGCTGGAAATGCAAGTGCAGAGCAACAATCGGCTGCCAAGGATGCATACTTGCCCATAGCAAATATCGTGAGGATCATGAGACCGATCCTCCCGACTCATGCCAAAATCTCCCATGATTCTAAGGAGACTCTACAATTATGTCTTTCTGAGTATATCGGCTTTGTCACCAGCGAAGCCAACGACATATGCAAGAACGACAAGAGAAGGACAATAACGGCGGAGGATCTGCTGTCGGCGCTGGAGAAGCTTGGGTTTGATCACTATGTCGATCATCTCGCTCTGTACCTTGATCTTTACCGTGGCCACAACAAAGGCTCCTCTTCTCAGCGTGGGGAGAGTTCGGCTATGGGGAGGAGCGCTGCTGATGGTGGGCCTGCAGTTGAGCAGCCGCCAACCCCTGATGCCCTTAACTATGGGCCCACCTTTCCTGGTACTGGGTATTTTGACCCAATGGGTATGGATGGGTTCCATGAAGCTGGATCAAGCTCGGGGGTGCTGGCCCTGCTGGCGTTGACGGATTTTCTTTTCCTTTCCGGCTCAGAATGA 1242 0.5097 MEQGRSSNVDSRITQNANLSHNNAGNASEQRQVRQSVANDSHIPTANVVRIMRRILPGHAKIDDDVKGTLQLLISEYIGFVTSEANDICRNNKRRMITADDVLAAFDQLGFDNYVAILTSYLNQYRNQTKGSSSQRGETSAGKRSTADGGLAIELPPAPSAPSFGPALELPLDPKAPSYGPKIELPPTHVAPNYGPFSVGPNPSTEYFHPMGMGAFYQGSRIPQNANPSPSNAGNASAEQQSAAKDAYLPIANIVRIMRPILPTHAKISHDSKETLQLCLSEYIGFVTSEANDICKNDKRRTITAEDLLSALEKLGFDHYVDHLALYLDLYRGHNKGSSSQRGESSAMGRSAADGGPAVEQPPTPDALNYGPTFPGTGYFDPMGMDGFHEAGSSSGVLALLALTDFLFLSGSE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01364 413 Gene3D Histone, subunit A 235 361 IPR009072 GO:0046982
Bach12g01364 413 Gene3D Histone, subunit A 27 151 IPR009072 GO:0046982
Bach12g01364 413 PRINTS CCAAT-binding transcription factor subunit A signature 295 313 - -
Bach12g01364 413 PRINTS CCAAT-binding transcription factor subunit A signature 276 294 - -
Bach12g01364 413 PRINTS CCAAT-binding transcription factor subunit A signature 314 332 - -
Bach12g01364 413 MobiDBLite consensus disorder prediction 128 142 - -
Bach12g01364 413 MobiDBLite consensus disorder prediction 128 158 - -
Bach12g01364 413 MobiDBLite consensus disorder prediction 220 241 - -
Bach12g01364 413 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 231 340 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bach12g01364 413 MobiDBLite consensus disorder prediction 338 372 - -
Bach12g01364 413 MobiDBLite consensus disorder prediction 219 241 - -
Bach12g01364 413 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 248 312 IPR003958 -
Bach12g01364 413 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 43 105 IPR003958 -
Bach12g01364 413 SUPERFAMILY Histone-fold 40 141 IPR009072 GO:0046982
Bach12g01364 413 SUPERFAMILY Histone-fold 246 362 IPR009072 GO:0046982
Bach12g01364 413 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01364 Bach-Chr12 9615002 9619198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01364 210 362 CCAAT-HAP3 Transcription Factor Family AT5G47670 45.860 1.03e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach12g01364 CBFD_NFYB_HMF 1.2e-20 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01364 K08065 - oeu:111368411 139.043