Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01338 ATGCCTGCACGCTTAAGGAATCTGACACTTTCTCCCAAAACCTTCTCCTTCATCTTACTTCTTTCAATAAGCTCTCTTCTCTTTTCATGTTGTTACTCCATTAATGAACAAGGCCAAGCTCTTCTAGCATGGAAGAACAGTTTGAAAACCACAGCAGATGCATTAGCATCGTGGAAGCCTTCGGATCCAAGTCCATGCAGCTGGTTTGGTGTGCACTGCAACTCAGAAGGAGATGTGGTGGAGATAAACTTGAAAACGCTGGATTTGCAAGGCTCATTGCCTTCAAATTTTCAGACTCTCAAGTCCTTGAAGATTCTTGTTGTCTCATCAACCAACATCACAGGCACAATCCCAAAAGAAATTGGAGACTATCAAGAGCTCATTTTTATTGATCTCAGCAACAATTCTCTCTTGGGTGAAATCCCAGAAGAAATCTGCAGGCTAAAAAAACTGCAGAGTTTATCTCTTCAAAAAAACTTCCTTGAAGGAAATTTTCCATCCAACATTGGAAACTTATCAAGCCTTGTAAATTTGACACTCTATGACAACCAACTCAGTGGTGAAATTCCAAAGAGTATTGGAGCCTTAAGCAAGCTCCAAACATTCAGAGCAGGAGGGAATAAAGACCTTAAGGGTGACCTGCCATGGGACATTGGAAACTGCACCAACTTGGTTATGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAGTCTTCCTTCATCAATTGGAAAGCTAAAAAGAATCCAAACTATTGCCATTTACACTGCTTTATTGTCAGGCTTTATCCCAGAAGAGATTGGGAATTGCAGTGAGCTGCAGAACCTGTACTTGTATCAGAACTCAATCTCAGGTCCAATCCCAAGACAAATTGGAGAGCTCAGCAACCTTCAGAGTATCCTTTTATGGAAAAACAGGATTGTGGGTACCATCCCAGATGAGATTGGAAGCTGCACAGAGCTCAAAGTCATGGACTTATCAGAAAACCTTCTCACAGGTAGCATACCAAGGAGTTTTGGGCAGCTATCAAATCTTCAAGAGCTTCAACTTAGTGTTAATCAGTTGTCAGGTATTATACCTCCTCAAATCACAAACTGCACTTCCCTGATTCAGCTTCAATTTGACAACAATGCCTTTTCTGGAGAGATTCCTTCCGTTATTGGCAATTTGAAAAGCTTGACCCTGTTCTTTGCCTGGCAGAACAAGCTGACAGGAAAAATCCCAGAAAGCCTCTCTGAGTGCCAGAAACTTGAGGCGCTTGATCTTTCCTATAATAATTTATCTGGTCCAATACCCAAACAACTATTTGGGTTGAGTAATCTCACAGAACTTTTGCTACTTTCCAATGATTTATCAGGATTTATACCACCTGATATAGGCAACTGCACAACCCTCTACAGGTTAAGATTGAACCACAACAGATTGGCAGGTAGCATTCCATCTGAGATTGGAAGATTGAAGAATTTGAACTTCTTGGATTTTAGCAGCAATCATCTTGTTTGGGAGATCCCTTCAACACTATCAGGATGTGAAAAGCTTGAGTTTGTGGATCTTCACTCAAATAGTCTCACCGGTTCTGTACCAGAGACTCTGCCTAAAAGTCTTCAGTTTTTAGACTTGTCAGACAACAGGCTAACAGGTTCACTAAGCCATACCATTGGCTCATTAACAGAATTAGCCAAACTCAACCTGGGAAAGAATCAGCTTAATGGAAGAATCCCTTCAGAGATTCTTTCTTGCTCGAAGCTACAACTTTTAGACTTAGGAAGCAATGGTTTTTCTGGAGAAGTTCCCAAGGAAGTTGGTCAACTCCCTTCACTAGAAATCTCACTCAATCTTAGCTGCAATCAATTTTCTGGTGAAATCCCATCTCAGTTCTCTGGCCTTAGCAGACTAGGAGTGCTTGATCTCTCCCACAACAAGCTCTCAGGGAACTTAAACTCTCTCTCAGAGCTTCAGAACCTTGTCTCCTTGAATCTTTCCTTCAATGACTTTTCTGGTGAATTGCCAAACACCCCTTTCTTCAGAAAACTCCCTCTCAGTGACCTCACTGCAAATGAAGGCCTCTATATCACCGGTGGTGTTGTGGCTCCAGCAAGCAGAATGAGACCCAATGATCATGCCAAATCAGCCATGAAATTCATAATGTCCATTCTCTTGAGCACCAGTGCAGTGCTGCTGCTGCTGCTTACAATCTACATCTTGGTTCGAGCTTACAAGTCCAATAGAGCACTCATGGAAAATGACACCTGGGAAATGACCTTGTATCAGAAGCTTGAGTTCTCCATAGATGAAGTCGTCAGAAACTTGACTTCAGCTAATGTCATTGGCACAGGAAGCTCTGGAGTTGTGTACAAGGTGACAGTCCCAAGTGGCGAAACACTAGCAGTGAAGAAGATGTGGTCACCAGAAGAATCAGGAGCATTCAGCTCAGAAATTCGAACCCTAGGTTCAATCAGACACAAGAACATCATTAGGCTTCTGGGTTGGGGATCCAACAGGAGCCTCAAGCTGCTGTTTTATGATTACCTCCCTAATGGGAGCTTGAGCTCACTGCTTCATGGTTCAGGAAAAGGAGGAGTAGAATGGGAAGCTAGATTTGATGTTATTTTAGGTGTGGCACATGCACTTGCATATTTGCACCATGATTGTGTGCCTGCAATATTGCATGGAGATGTCAAAGCCATGAATGTGCTGCTGGGTCCTGGAAATCAACCTTACCTTGCTGATTTTGGCCTTGCAAGAATTGCAAATGAGAATATTGATGATGGTACAAATTCCAAGCCAGTTCAAAGACCTTACCTTGCTGGTTCCTATGGATACATGGCTCCTGAGCATGCATCAATGCAGAGGATCACTGAGAAGAGTGATATCTACAGTTTTGGTGTGGTTCTTCTTGAGGTCTTGACAGGGAGGCACCCACTGGACCCAACTTTACCAGGTGGTGCACCCTTGGTTCAGTGGGTTAGGAACCATTTAGCCACCAAAGGAGACCCATCTGACATTCTTGACCAAAGGCTGAGGGGAAGGGTTGATCCTACCATGCATGAAATGCTACAGACTCTTGCTGTATCATTTCTGTGTATCAGCACCAGAGCTGAAGGGCGCCCAACAATGAAGGATGTGGTTGCAATGCTCAAGGAAATCAGACCTGATGAGGCCACAAGAACAGACCCCCAGTTTCTCAAGGGGGATTTGCAAGCACATAGCTCTCCACTACCACCTATGAATGTAGCCTCACATGGTTCTTCTAGCTGCTCCTTTAATTTCTCATCAGATGACTCAATCTGCTGA 3291 0.4342 MPARLRNLTLSPKTFSFILLLSISSLLFSCCYSINEQGQALLAWKNSLKTTADALASWKPSDPSPCSWFGVHCNSEGDVVEINLKTLDLQGSLPSNFQTLKSLKILVVSSTNITGTIPKEIGDYQELIFIDLSNNSLLGEIPEEICRLKKLQSLSLQKNFLEGNFPSNIGNLSSLVNLTLYDNQLSGEIPKSIGALSKLQTFRAGGNKDLKGDLPWDIGNCTNLVMLGLAETSISGSLPSSIGKLKRIQTIAIYTALLSGFIPEEIGNCSELQNLYLYQNSISGPIPRQIGELSNLQSILLWKNRIVGTIPDEIGSCTELKVMDLSENLLTGSIPRSFGQLSNLQELQLSVNQLSGIIPPQITNCTSLIQLQFDNNAFSGEIPSVIGNLKSLTLFFAWQNKLTGKIPESLSECQKLEALDLSYNNLSGPIPKQLFGLSNLTELLLLSNDLSGFIPPDIGNCTTLYRLRLNHNRLAGSIPSEIGRLKNLNFLDFSSNHLVWEIPSTLSGCEKLEFVDLHSNSLTGSVPETLPKSLQFLDLSDNRLTGSLSHTIGSLTELAKLNLGKNQLNGRIPSEILSCSKLQLLDLGSNGFSGEVPKEVGQLPSLEISLNLSCNQFSGEIPSQFSGLSRLGVLDLSHNKLSGNLNSLSELQNLVSLNLSFNDFSGELPNTPFFRKLPLSDLTANEGLYITGGVVAPASRMRPNDHAKSAMKFIMSILLSTSAVLLLLLTIYILVRAYKSNRALMENDTWEMTLYQKLEFSIDEVVRNLTSANVIGTGSSGVVYKVTVPSGETLAVKKMWSPEESGAFSSEIRTLGSIRHKNIIRLLGWGSNRSLKLLFYDYLPNGSLSSLLHGSGKGGVEWEARFDVILGVAHALAYLHHDCVPAILHGDVKAMNVLLGPGNQPYLADFGLARIANENIDDGTNSKPVQRPYLAGSYGYMAPEHASMQRITEKSDIYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWVRNHLATKGDPSDILDQRLRGRVDPTMHEMLQTLAVSFLCISTRAEGRPTMKDVVAMLKEIRPDEATRTDPQFLKGDLQAHSSPLPPMNVASHGSSSCSFNFSSDDSIC 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01338 1096 ProSiteProfiles Protein kinase domain profile. 769 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01338 1096 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Bach12g01338 1096 Gene3D Ribonuclease Inhibitor 270 528 IPR032675 -
Bach12g01338 1096 SUPERFAMILY L domain-like 32 307 - -
Bach12g01338 1096 MobiDBLite consensus disorder prediction 1063 1096 - -
Bach12g01338 1096 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 304 1039 - -
Bach12g01338 1096 SMART LRR_sd22_2 389 412 - -
Bach12g01338 1096 SMART LRR_sd22_2 531 557 - -
Bach12g01338 1096 SMART LRR_sd22_2 485 511 - -
Bach12g01338 1096 SMART LRR_sd22_2 413 439 - -
Bach12g01338 1096 SMART LRR_sd22_2 628 653 - -
Bach12g01338 1096 SMART LRR_sd22_2 148 174 - -
Bach12g01338 1096 SMART LRR_sd22_2 269 295 - -
Bach12g01338 1096 Gene3D Ribonuclease Inhibitor 207 269 IPR032675 -
Bach12g01338 1096 Gene3D Ribonuclease Inhibitor 609 692 IPR032675 -
Bach12g01338 1096 Gene3D Transferase(Phosphotransferase) domain 1 843 1064 - -
Bach12g01338 1096 Gene3D Ribonuclease Inhibitor 529 608 IPR032675 -
Bach12g01338 1096 FunFam Leucine-rich receptor-like protein kinase family protein 336 608 - -
Bach12g01338 1096 FunFam Putative LRR receptor-like serine/threonine-protein kinase 754 842 - -
Bach12g01338 1096 ProSiteProfiles Leucine-rich repeat profile. 630 652 IPR001611 GO:0005515
Bach12g01338 1096 Pfam Leucine rich repeat 294 354 IPR001611 GO:0005515
Bach12g01338 1096 Pfam Leucine rich repeat 609 664 IPR001611 GO:0005515
Bach12g01338 1096 SUPERFAMILY Protein kinase-like (PK-like) 753 1045 IPR011009 -
Bach12g01338 1096 PRINTS Leucine-rich repeat signature 628 641 - -
Bach12g01338 1096 PRINTS Leucine-rich repeat signature 534 547 - -
Bach12g01338 1096 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Bach12g01338 1096 FunFam Leucine-rich receptor-like protein kinase family protein 34 191 - -
Bach12g01338 1096 SMART LRR_typ_2 172 196 IPR003591 -
Bach12g01338 1096 SMART LRR_typ_2 628 651 IPR003591 -
Bach12g01338 1096 SMART LRR_typ_2 485 509 IPR003591 -
Bach12g01338 1096 SMART LRR_typ_2 555 579 IPR003591 -
Bach12g01338 1096 SMART LRR_typ_2 603 627 IPR003591 -
Bach12g01338 1096 SMART LRR_typ_2 341 365 IPR003591 -
Bach12g01338 1096 SMART LRR_typ_2 437 461 IPR003591 -
Bach12g01338 1096 SMART LRR_typ_2 293 317 IPR003591 -
Bach12g01338 1096 SMART serkin_6 769 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01338 1096 FunFam Putative LRR receptor-like serine/threonine-protein kinase 609 694 - -
Bach12g01338 1096 Gene3D Phosphorylase Kinase; domain 1 734 842 - -
Bach12g01338 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 887 899 IPR008271 GO:0004672|GO:0006468
Bach12g01338 1096 MobiDBLite consensus disorder prediction 1072 1096 - -
Bach12g01338 1096 ProSitePatterns Protein kinases ATP-binding region signature. 775 798 IPR017441 GO:0005524
Bach12g01338 1096 Gene3D Ribonuclease Inhibitor 33 206 IPR032675 -
Bach12g01338 1096 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 843 1062 - -
Bach12g01338 1096 Pfam Protein kinase domain 772 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01338 1096 FunFam Predicted protein 192 288 - -
Bach12g01338 1096 SUPERFAMILY RNI-like 286 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01338 Bach-Chr12 9406410 9409809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01338 31 1095 Receptor kinase-like Gene Family AT5G56040 66.945 0.0 1425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach12g01338 Pkinase 2.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01338 - - qsa:O6P43_013503 1686.77